Literature DB >> 16464009

Mechanistic comparison of high-fidelity and error-prone DNA polymerases and ligases involved in DNA repair.

Alexander K Showalter1, Brandon J Lamarche, Marina Bakhtina, Mei-I Su, Kuo-Hsiang Tang, Ming-Daw Tsai.   

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Year:  2006        PMID： 16464009     DOI： 10.1021/cr040487k

Source DB:  PubMed          Journal:  Chem Rev        ISSN： 0009-2665            Impact factor:   60.622


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  27 in total

1.  Exploring the role of large conformational changes in the fidelity of DNA polymerase beta.

Authors:  Yun Xiang; Myron F Goodman; William A Beard; Samuel H Wilson; Arieh Warshel
Journal:  Proteins       Date:  2008-01-01

2.  Catalytic mechanism of human DNA polymerase lambda with Mg2+ and Mn2+ from ab initio quantum mechanical/molecular mechanical studies.

Authors:  G Andrés Cisneros; Lalith Perera; Miguel García-Díaz; Katarzyna Bebenek; Thomas A Kunkel; Lee G Pedersen
Journal:  DNA Repair (Amst)       Date:  2008-08-30

3.  Incorrect nucleotide insertion at the active site of a G:A mismatch catalyzed by DNA polymerase beta.

Authors:  Ping Lin; Vinod K Batra; Lars C Pedersen; William A Beard; Samuel H Wilson; Lee G Pedersen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-07       Impact factor: 11.205

4.  Substrate-dependent millisecond domain motions in DNA polymerase β.

Authors:  Rebecca B Berlow; Monalisa Swain; Shibani Dalal; Joann B Sweasy; J Patrick Loria
Journal:  J Mol Biol       Date:  2012-03-23       Impact factor: 5.469

5.  An abridged transition state model to derive structure, dynamics, and energy components of DNA polymerase β fidelity.

Authors:  Martin Klvaňa; Petr Jeřábek; Myron F Goodman; Jan Florián
Journal:  Biochemistry       Date:  2011-07-25       Impact factor: 3.162

6.  The control of the discrimination between dNTP and rNTP in DNA and RNA polymerase.

Authors:  Hanwool Yoon; Arieh Warshel
Journal:  Proteins       Date:  2016-08-10

7.  A water-mediated and substrate-assisted catalytic mechanism for Sulfolobus solfataricus DNA polymerase IV.

Authors:  Lihua Wang; Xinyun Yu; Po Hu; Suse Broyde; Yingkai Zhang
Journal:  J Am Chem Soc       Date:  2007-03-22       Impact factor: 15.419

8.  DNA polymerase beta catalytic efficiency mirrors the Asn279-dCTP H-bonding strength.

Authors:  Václav Martínek; Urban Bren; Myron F Goodman; Arieh Warshel; Jan Florián
Journal:  FEBS Lett       Date:  2007-01-25       Impact factor: 4.124

Review 9.  Why nature really chose phosphate.

Authors:  Shina C L Kamerlin; Pankaz K Sharma; Ram B Prasad; Arieh Warshel
Journal:  Q Rev Biophys       Date:  2013-01-15       Impact factor: 5.318

10.  Quantum mechanics/molecular mechanics investigation of the mechanism of phosphate transfer in human uridine-cytidine kinase 2.

Authors:  Adam J T Smith; Ying Li; K N Houk
Journal:  Org Biomol Chem       Date:  2009-05-06       Impact factor: 3.876
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