Literature DB >> 16461898

Evolution of enzymes in a series is driven by dissimilar functional demands.

Armindo Salvador1, Michael A Savageau.   

Abstract

That distinct enzyme activities in an unbranched metabolic pathway are evolutionarily tuned to a single functional requirement is a pervasive assumption. Here we test this assumption by examining the activities of two consecutively acting enzymes in human erythrocytes with an approach to quantitative evolutionary design that avoids the above-mentioned assumption. We previously found that avoidance of NADPH depletion during the pulses of oxidative load to which erythrocytes are normally exposed is the main functional requirement mediating selection for high glucose-6-phosphate dehydrogenase activity. In the present study, we find that, in contrast, the maintenance of oxidized glutathione at low concentrations is the main functional requirement mediating selection for high glutathione reductase activity. The results in this case show that, contrary to the assumption of a single functional requirement, natural selection for the normal activities of the distinct enzymes in the pathway is mediated by different requirements. On the other hand, the results agree with the more general principles that underlie our approach. Namely, that (i) the values of biochemical parameters evolve so as to fulfill the various performance requirements that are relevant to achieve high fitness, and (ii) these performance requirements can be inferred from quantitative systems theory considerations, informed by knowledge of specific aspects of the biochemistry, physiology, genetics, and ecology of the organism.

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Year:  2006        PMID: 16461898      PMCID: PMC1413729          DOI: 10.1073/pnas.0510776103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

Review 1.  Nutritional and metabolic aspects of glutathione.

Authors:  E Beutler
Journal:  Annu Rev Nutr       Date:  1989       Impact factor: 11.848

2.  The matches, achieved by natural selection, between biological capacities and their natural loads.

Authors:  J Diamond; K Hammond
Journal:  Experientia       Date:  1992-06-15

3.  The rationalization of high enzyme concentration in metabolic pathways such as glycolysis.

Authors:  G F Betts; D K Srivastava
Journal:  J Theor Biol       Date:  1991-07-21       Impact factor: 2.691

4.  Metabolite transfer via enzyme-enzyme complexes.

Authors:  D K Srivastava; S A Bernhard
Journal:  Science       Date:  1986-11-28       Impact factor: 47.728

5.  Deficiency of two red-cell flavin enzymes in a population in Sardinia: was glutathione reductase deficiency specifically selected for by malaria?

Authors:  B B Anderson; L Corda; G M Perry; D Pilato; M Giuberti; C Vullo
Journal:  Am J Hum Genet       Date:  1995-09       Impact factor: 11.025

6.  Thioltransferase is a specific glutathionyl mixed disulfide oxidoreductase.

Authors:  S A Gravina; J J Mieyal
Journal:  Biochemistry       Date:  1993-04-06       Impact factor: 3.162

Review 7.  Hemolysis and infection: categories and mechanisms of their interrelationship.

Authors:  F E Berkowitz
Journal:  Rev Infect Dis       Date:  1991 Nov-Dec

8.  Covalent binding of glutathione to hemoglobin. II. Functional consequences and structural changes reflected in NMR spectra.

Authors:  C T Craescu; C Poyart; C Schaeffer; M C Garel; J Kister; Y Beuzard
Journal:  J Biol Chem       Date:  1986-11-05       Impact factor: 5.157

9.  Thioltransferase in human red blood cells: purification and properties.

Authors:  J J Mieyal; D W Starke; S A Gravina; C Dothey; J S Chung
Journal:  Biochemistry       Date:  1991-06-25       Impact factor: 3.162

10.  Adaptation at specific loci. V. Metabolically adjacent enzyme loci may have very distinct experiences of selective pressures.

Authors:  P A Carter; W B Watt
Journal:  Genetics       Date:  1988-08       Impact factor: 4.562

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  9 in total

1.  Flux control and excess capacity in the enzymes of glycolysis and their relationship to flight metabolism in Drosophila melanogaster.

Authors:  Walter F Eanes; Thomas J S Merritt; Jonathan M Flowers; Seiji Kumagai; Efe Sezgin; Chen-Tseh Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-11       Impact factor: 11.205

2.  Design Principle for Decoding Calcium Signals to Generate Specific Gene Expression Via Transcription.

Authors:  Junli Liu; Gioia Lenzoni; Marc R Knight
Journal:  Plant Physiol       Date:  2019-11-19       Impact factor: 8.340

3.  Relating mutant genotype to phenotype via quantitative behavior of the NADPH redox cycle in human erythrocytes.

Authors:  Pedro M B M Coelho; Armindo Salvador; Michael A Savageau
Journal:  PLoS One       Date:  2010-09-28       Impact factor: 3.240

4.  Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points.

Authors:  Uri Barenholz; Dan Davidi; Ed Reznik; Yinon Bar-On; Niv Antonovsky; Elad Noor; Ron Milo
Journal:  Elife       Date:  2017-02-07       Impact factor: 8.140

5.  Mapping the phenotypic repertoire of the cytoplasmic 2-Cys peroxiredoxin - Thioredoxin system. 1. Understanding commonalities and differences among cell types.

Authors:  Gianluca Selvaggio; Pedro M B M Coelho; Armindo Salvador
Journal:  Redox Biol       Date:  2017-12-21       Impact factor: 11.799

6.  Quantifying global tolerance of biochemical systems: design implications for moiety-transfer cycles.

Authors:  Pedro M B M Coelho; Armindo Salvador; Michael A Savageau
Journal:  PLoS Comput Biol       Date:  2009-03-20       Impact factor: 4.475

7.  Identifying quantitative operation principles in metabolic pathways: a systematic method for searching feasible enzyme activity patterns leading to cellular adaptive responses.

Authors:  Gonzalo Guillén-Gosálbez; Albert Sorribas
Journal:  BMC Bioinformatics       Date:  2009-11-24       Impact factor: 3.169

8.  Use of physiological constraints to identify quantitative design principles for gene expression in yeast adaptation to heat shock.

Authors:  Ester Vilaprinyo; Rui Alves; Albert Sorribas
Journal:  BMC Bioinformatics       Date:  2006-04-03       Impact factor: 3.169

Review 9.  Evaluating dosage compensation as a cause of duplicate gene retention in Paramecium tetraurelia.

Authors:  Timothy Hughes; Diana Ekman; Himanshu Ardawatia; Arne Elofsson; David A Liberles
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

  9 in total

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