Literature DB >> 16460908

Comparative genomic organization of the human and bovine PRNP locus.

Sang-Haeng Choi1, Il-Chul Kim, Dae-Soo Kim, Dae-Won Kim, Sung-Hwa Chae, Han-Ho Choi, Inho Choi, Jung-Sou Yeo, Mi-Na Song, Hong-Seog Park.   

Abstract

We sequenced a 208-kb BAC clone spanning the bovine prion protein (PRNP) locus, and compared the genomic structure with that of human. As a result, we determined the precise breakpoint between the two syntenic genomes, located on the 5' UTR of the PRNP gene, and discovered two highly repetitive sequences near the breakpoint. Further analysis demonstrated that the genomic structure of three genes, PRNP, PRND, and RASSF2, within the syntenic region of the bovine genome is highly conserved in order and orientation. The PRNT locus was not found in bovine but is conserved in several primates, including human. Moreover, we confirmed that the bovine RASSF2 is composed of 10 exons, as is the human gene, showing some difference from a previous report. Our findings may provide useful clues for understanding the evolutional process in the PRNP locus and also the mechanism that allows TSE from cattle to infect humans.

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Year:  2006        PMID: 16460908     DOI: 10.1016/j.ygeno.2005.12.012

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  5 in total

1.  Cloning of the bovine prion-like Shadoo (SPRN) gene by comparative analysis of the predicted genomic locus.

Authors:  Cristina Uboldi; Marianna Paulis; Elena Guidi; Anna Bertoni; Giulia Pia Di Meo; Angela Perucatti; Leopoldo Iannuzzi; Elena Raimondi; Ronald M Brunner; André Eggen; Luca Ferretti
Journal:  Mamm Genome       Date:  2006-11-07       Impact factor: 2.957

2.  Is prnt a pseudogene? Identification of ram Prt in testis and ejaculated spermatozoa.

Authors:  Jorge Pimenta; Ana Domingos; Pedro Santos; Carla C Marques; Cátia Cantante; Ana Santos; João P Barbas; Maria C Baptista; António E M Horta; Aldino Viegas; Patrícia Mesquita; João Gonçalves; Carlos A Fontes; José A M Prates; Rosa M L N Pereira
Journal:  PLoS One       Date:  2012-08-24       Impact factor: 3.240

3.  Comparative genomic analysis of prion genes.

Authors:  Marko Premzl; Vera Gamulin
Journal:  BMC Genomics       Date:  2007-01-02       Impact factor: 3.969

Review 4.  Vertebrate food products as a potential source of prion-like α-synuclein.

Authors:  Bryan Andrew Killinger; Viviane Labrie
Journal:  NPJ Parkinsons Dis       Date:  2017-11-24

5.  Sequence level analysis of recently duplicated regions in soybean [Glycine max (L.) Merr.] genome.

Authors:  Kyujung Van; Dong Hyun Kim; Chun Mei Cai; Moon Young Kim; Jin Hee Shin; Michelle A Graham; Randy C Shoemaker; Beom-Soon Choi; Tae-Jin Yang; Suk-Ha Lee
Journal:  DNA Res       Date:  2008-03-11       Impact factor: 4.458

  5 in total

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