Literature DB >> 16460772

Unifying evolutionary dynamics: from individual stochastic processes to macroscopic models.

Nicolas Champagnat1, Régis Ferrière, Sylvie Méléard.   

Abstract

A distinctive signature of living systems is Darwinian evolution, that is, a propensity to generate as well as self-select individual diversity. To capture this essential feature of life while describing the dynamics of populations, mathematical models must be rooted in the microscopic, stochastic description of discrete individuals characterized by one or several adaptive traits and interacting with each other. The simplest models assume asexual reproduction and haploid genetics: an offspring usually inherits the trait values of her progenitor, except when a mutation causes the offspring to take a mutation step to new trait values; selection follows from ecological interactions among individuals. Here we present a rigorous construction of the microscopic population process that captures the probabilistic dynamics over continuous time of birth, mutation, and death, as influenced by the trait values of each individual, and interactions between individuals. A by-product of this formal construction is a general algorithm for efficient numerical simulation of the individual-level model. Once the microscopic process is in place, we derive different macroscopic models of adaptive evolution. These models differ in the renormalization they assume, i.e. in the limits taken, in specific orders, on population size, mutation rate, mutation step, while rescaling time accordingly. The macroscopic models also differ in their mathematical nature: deterministic, in the form of ordinary, integro-, or partial differential equations, or probabilistic, like stochastic partial differential equations or superprocesses. These models include extensions of Kimura's equation (and of its approximation for small mutation effects) to frequency- and density-dependent selection. A novel class of macroscopic models obtains when assuming that individual birth and death occur on a short timescale compared with the timescale of typical population growth. On a timescale of very rare mutations, we establish rigorously the models of "trait substitution sequences" and their approximation known as the "canonical equation of adaptive dynamics". We extend these models to account for mutation bias and random drift between multiple evolutionary attractors. The renormalization approach used in this study also opens promising avenues to study and predict patterns of life-history allometries, thereby bridging individual physiology, genetic variation, and ecological interactions in a common evolutionary framework.

Entities:  

Mesh:

Year:  2006        PMID: 16460772     DOI: 10.1016/j.tpb.2005.10.004

Source DB:  PubMed          Journal:  Theor Popul Biol        ISSN: 0040-5809            Impact factor:   1.570


  56 in total

1.  Lévy flights in evolutionary ecology.

Authors:  Benjamin Jourdain; Sylvie Méléard; Wojbor A Woyczynski
Journal:  J Math Biol       Date:  2011-10-15       Impact factor: 2.259

2.  Evolving ecological networks and the emergence of biodiversity patterns across temperature gradients.

Authors:  James C Stegen; Regis Ferriere; Brian J Enquist
Journal:  Proc Biol Sci       Date:  2011-09-21       Impact factor: 5.349

3.  Chaotic Red Queen coevolution in three-species food chains.

Authors:  Fabio Dercole; Regis Ferriere; Sergio Rinaldi
Journal:  Proc Biol Sci       Date:  2010-03-31       Impact factor: 5.349

4.  Invasion and adaptive evolution for individual-based spatially structured populations.

Authors:  Nicolas Champagnat; Sylvie Méléard
Journal:  J Math Biol       Date:  2007-06-07       Impact factor: 2.259

5.  Adaptive dynamics for physiologically structured population models.

Authors:  Michel Durinx; J A J Hans Metz; Géza Meszéna
Journal:  J Math Biol       Date:  2007-10-18       Impact factor: 2.259

6.  Trait Substitution Sequence process and Canonical Equation for age-structured populations.

Authors:  Sylvie Méléard; Viet Chi Tran
Journal:  J Math Biol       Date:  2008-07-31       Impact factor: 2.259

Review 7.  Cognition and biology: perspectives from information theory.

Authors:  Rodrick Wallace
Journal:  Cogn Process       Date:  2013-06-19

8.  SCALING LIMITS OF A MODEL FOR SELECTION AT TWO SCALES.

Authors:  Shishi Luo; Jonathan C Mattingly
Journal:  Nonlinearity       Date:  2017-03-15

9.  The impact of cell density and mutations in a model of multidrug resistance in solid tumors.

Authors:  James Greene; Orit Lavi; Michael M Gottesman; Doron Levy
Journal:  Bull Math Biol       Date:  2014-02-20       Impact factor: 1.758

10.  A multi-scale eco-evolutionary model of cooperation reveals how microbial adaptation influences soil decomposition.

Authors:  Elsa Abs; Hélène Leman; Régis Ferrière
Journal:  Commun Biol       Date:  2020-09-21
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.