Literature DB >> 16453658

Developmentally regulated transcription of Dictyostelium discoideum plasmid Ddp1.

A Noegel1, B A Metz, K L Williams.   

Abstract

The presence of high copy number plasmid DNA has been described for several independent wild isolates of the lower eukaryote Dictyostelium discoideum, a model organism in developmental biology. The function of these plasmids has remained unclear so far. To understand the possible functions of the plasmids we have analyzed the transcription of one plasmid, Ddp1, in the wild strains NC4 and V12. The plasmid is transcribed in an identical fashion in both strains. Ddp1 codes for three RNA species in growth-phase cells, at least two of which are present in the poly(A) fraction. RNA isolated from cells of different developmental stages revealed the existence of five more transcripts, the majority of them being found in the poly(A) fraction. These transcripts are present at distinct time points during development. Both growth-phase and development-specific transcripts were found exclusively in Ddp1-containing strains. Mapping of the transcripts to the plasmid showed that some of them originated from the same area. These results indicated an overlapping of their coding regions.

Entities:  

Year:  1985        PMID: 16453658      PMCID: PMC554733          DOI: 10.1002/j.1460-2075.1985.tb04150.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  21 in total

1.  Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

Authors:  A C Chang; S N Cohen
Journal:  J Bacteriol       Date:  1978-06       Impact factor: 3.490

2.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

3.  Changes in the abundance of polyadenylated RNA during slime mould development measured using cloned molecular hybridization probes.

Authors:  J G Williams; M M Lloyd
Journal:  J Mol Biol       Date:  1979-03-25       Impact factor: 5.469

4.  Fractionation and functional analysis of newly synthesized and decaying messenger RNAs from vegetative cells of Dictyostelium discoideum.

Authors:  C M Palatnik; R V Storti; A Jacobson
Journal:  J Mol Biol       Date:  1979-03-05       Impact factor: 5.469

5.  Induction and modulation of cell-type-specific gene expression in Dictyostelium.

Authors:  M C Mehdy; D Ratner; R A Firtel
Journal:  Cell       Date:  1983-03       Impact factor: 41.582

6.  A chicken histone H3 gene contains intervening sequences.

Authors:  J D Engel; B J Sugarman; J B Dodgson
Journal:  Nature       Date:  1982-06-03       Impact factor: 49.962

7.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

8.  Isolation and partial characterization of the Drosophila alcohol dehydrogenase gene.

Authors:  D A Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  1980-10       Impact factor: 11.205

9.  Evidence that positional information is used to establish the prestalk-prespore pattern in Dictyostelium discoideum aggregates.

Authors:  M Krefft; L Voet; J H Gregg; H Mairhofer; K L Williams
Journal:  EMBO J       Date:  1984-01       Impact factor: 11.598

10.  Identification of an endogenous plasmid in Dictyostelium discoideum.

Authors:  B A Metz; T E Ward; D L Welker; K L Williams
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  22 in total

1.  Regulation of the Dictyostelium cAMP-induced, prestalk-specific DdrasD gene: identification of cis-acting elements.

Authors:  R K Esch; P K Howard; R A Firtel
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

2.  Establishment of a transient expression system for Dictyostelium discoideum.

Authors:  P K Howard; K G Ahern; R A Firtel
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

3.  Tandem repeats in extrachromosomal ribosomal DNA of Dictyostelium discoideum, resulting from chromosomal mutations.

Authors:  R A Cole; K L Williams
Journal:  Genetics       Date:  1992-04       Impact factor: 4.562

4.  Sequence organization and gene expression of pGD1, a plasmid found in a wild isolate of Dictyostelium.

Authors:  H Orii; Y Tanaka; K Yanagisawa
Journal:  Nucleic Acids Res       Date:  1989-02-25       Impact factor: 16.971

5.  Nucleotide sequence of a developmentally regulated Dictyostelium discoideum endogenous plasmid gene and 5' flanking region.

Authors:  N A Farrar; T J Longhurst; D A Leigh; K L Williams
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

Review 6.  Genetics of early Dictyostelium discoideum development.

Authors:  R H Kessin
Journal:  Microbiol Rev       Date:  1988-03

7.  The replication origin position and its relationship to a negative trans-acting transcription regulator encoded by Dictyostelium discoideum nuclear plasmid Ddp1.

Authors:  H Kiyosawa; J E Hughes; D L Welker
Journal:  Curr Genet       Date:  1995-04       Impact factor: 3.886

8.  Plasmid maintenance functions encoded on Dictyostelium discoideum nuclear plasmid Ddp1.

Authors:  J E Hughes; H Kiyosawa; D L Welker
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

9.  A new type of plasmid from a wild isolate of Dictyostelium species: the existence of closely situated long inverted repeats.

Authors:  H Orii; K Suzuki; Y Tanaka; K Yanagisawa
Journal:  Nucleic Acids Res       Date:  1987-02-11       Impact factor: 16.971

10.  Transcript and sequence analysis of a 5.1 kb contiguous fragment of Dictyostelium discoideum plasmid Ddp1 that contains the origin of replication and codes for several transcripts.

Authors:  C B Gurniak; A G Bang; A A Noegel
Journal:  Curr Genet       Date:  1990-04       Impact factor: 3.886

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