Literature DB >> 16452623

Global structural rearrangement of the cell penetrating ribonuclease colicin E3 on interaction with phospholipid membranes.

Khédidja Mosbahi1, Daniel Walker, Richard James, Geoffrey R Moore, Colin Kleanthous.   

Abstract

Nuclease type colicins and related bacteriocins possess the unprecedented ability to translocate an enzymatic polypeptide chain across the Gram-negative cell envelope. Here we use the rRNase domain of the cytotoxic ribonuclease colicin E3 to examine the structural changes on its interaction with the membrane. Using phospholipid vesicles as model membranes we show that anionic membranes destabilize the nuclease domain of the rRNase type colicin E3. Intrinsic tryptophan fluorescence and circular dichroism show that vesicles consisting of pure DOPA act as a powerful protein denaturant toward the rRNase domain, although this interaction can be entirely prevented by the addition of salt. Binding of E3 rRNase to DOPA vesicles is an endothermic process (DeltaH=24 kcal mol-1), reflecting unfolding of the protein. Consistent with this, binding of a highly destabilized mutant of the E3 rRNase to DOPA vesicles is exothermic. With mixed vesicles containing anionic and neutral phospholipids at a ratio of 1:3, set to mimic the charge of the Escherichia coli inner membrane, destabilization of E3 rRNase is lessened, although the melting temperature of the protein at pH 7.0 is greatly reduced from 50 degrees C to 30 degrees C. The interaction of E3 rRNase with 1:3 DOPA:DOPC vesicles is also highly dependent on both ionic strength and temperature. We discuss these results in terms of the likely interaction of the E3 rRNase and the related E9 DNase domains with the E. coli inner membrane and their subsequent translocation to the cell cytoplasm.

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Year:  2006        PMID: 16452623      PMCID: PMC2249781          DOI: 10.1110/ps.051890306

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  32 in total

Review 1.  Pore-forming colicins and their relatives.

Authors:  J H Lakey; S L Slatin
Journal:  Curr Top Microbiol Immunol       Date:  2001       Impact factor: 4.291

2.  Mechanism and cleavage specificity of the H-N-H endonuclease colicin E9.

Authors:  A J Pommer; S Cal; A H Keeble; D Walker; S J Evans; U C Kühlmann; A Cooper; B A Connolly; A M Hemmings; G R Moore; R James; C Kleanthous
Journal:  J Mol Biol       Date:  2001-12-07       Impact factor: 5.469

3.  Identification of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3.

Authors:  Daniel Walker; Lorna Lancaster; Richard James; Colin Kleanthous
Journal:  Protein Sci       Date:  2004-05-07       Impact factor: 6.725

4.  Binding of prion protein to lipid membranes and implications for prion conversion.

Authors:  Narinder Sanghera; Teresa J T Pinheiro
Journal:  J Mol Biol       Date:  2002-02-01       Impact factor: 5.469

5.  Specific inactivation of 16S ribosomal RNA induced by colicin E3 in vivo.

Authors:  C M Bowman; J E Dahlberg; T Ikemura; J Konisky; M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  1971-05       Impact factor: 11.205

6.  Binding of Nisin Z to bilayer vesicles as determined with isothermal titration calorimetry.

Authors:  E Breukink; P Ganz; B de Kruijff; J Seelig
Journal:  Biochemistry       Date:  2000-08-22       Impact factor: 3.162

7.  Inhibition of a ribosome-inactivating ribonuclease: the crystal structure of the cytotoxic domain of colicin E3 in complex with its immunity protein.

Authors:  S Carr; D Walker; R James; C Kleanthous; A M Hemmings
Journal:  Structure       Date:  2000-09-15       Impact factor: 5.006

8.  Protein transduction domains of HIV-1 and SIV TAT interact with charged lipid vesicles. Binding mechanism and thermodynamic analysis.

Authors:  André Ziegler; Xiaochun Li Blatter; Anna Seelig; Joachim Seelig
Journal:  Biochemistry       Date:  2003-08-05       Impact factor: 3.162

9.  Structural inhibition of the colicin D tRNase by the tRNA-mimicking immunity protein.

Authors:  Marc Graille; Liliana Mora; Richard H Buckingham; Herman van Tilbeurgh; Miklos de Zamaroczy
Journal:  EMBO J       Date:  2004-03-11       Impact factor: 11.598

10.  Destabilization of the colicin E9 Endonuclease domain by interaction with negatively charged phospholipids: implications for colicin translocation into bacteria.

Authors:  Khédidja Mosbahi; Daniel Walker; Edward Lea; Geoffrey R Moore; Richard James; Colin Kleanthous
Journal:  J Biol Chem       Date:  2004-03-23       Impact factor: 5.157

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  14 in total

1.  Contact-dependent growth inhibition toxins exploit multiple independent cell-entry pathways.

Authors:  Julia L E Willett; Grant C Gucinski; Jackson P Fatherree; David A Low; Christopher S Hayes
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

2.  Can't you hear me knocking: contact-dependent competition and cooperation in bacteria.

Authors:  Allison M Jones; David A Low; Christopher S Hayes
Journal:  Emerg Top Life Sci       Date:  2017-04-21

3.  FtsH-dependent processing of RNase colicins D and E3 means that only the cytotoxic domains are imported into the cytoplasm.

Authors:  Mathieu Chauleau; Liliana Mora; Justyna Serba; Miklos de Zamaroczy
Journal:  J Biol Chem       Date:  2011-06-23       Impact factor: 5.157

4.  The Cytoplasm-Entry Domain of Antibacterial CdiA Is a Dynamic α-Helical Bundle with Disulfide-Dependent Structural Features.

Authors:  Nicholas L Bartelli; Sheng Sun; Grant C Gucinski; Hongjun Zhou; Kiho Song; Christopher S Hayes; Frederick W Dahlquist
Journal:  J Mol Biol       Date:  2019-06-08       Impact factor: 5.469

5.  Polymorphic Toxins and Their Immunity Proteins: Diversity, Evolution, and Mechanisms of Delivery.

Authors:  Zachary C Ruhe; David A Low; Christopher S Hayes
Journal:  Annu Rev Microbiol       Date:  2020-07-17       Impact factor: 15.500

6.  The proton-motive force is required for translocation of CDI toxins across the inner membrane of target bacteria.

Authors:  Zachary C Ruhe; Josephine Y Nguyen; Christina M Beck; David A Low; Christopher S Hayes
Journal:  Mol Microbiol       Date:  2014-09-17       Impact factor: 3.501

7.  The Stable Interaction Between Signal Peptidase LepB of Escherichia coli and Nuclease Bacteriocins Promotes Toxin Entry into the Cytoplasm.

Authors:  Liliana Mora; Karine Moncoq; Patrick England; Jacques Oberto; Miklos de Zamaroczy
Journal:  J Biol Chem       Date:  2015-10-23       Impact factor: 5.157

Review 8.  Swimming against the tide: progress and challenges in our understanding of colicin translocation.

Authors:  Colin Kleanthous
Journal:  Nat Rev Microbiol       Date:  2010-11-09       Impact factor: 60.633

9.  Interaction of nuclease colicins with membranes: insertion depth correlates with bilayer perturbation.

Authors:  Mireille Vankemmelbeke; Paul O Shea; Richard James; Christopher N Penfold
Journal:  PLoS One       Date:  2012-09-28       Impact factor: 3.240

Review 10.  Colicin biology.

Authors:  Eric Cascales; Susan K Buchanan; Denis Duché; Colin Kleanthous; Roland Lloubès; Kathleen Postle; Margaret Riley; Stephen Slatin; Danièle Cavard
Journal:  Microbiol Mol Biol Rev       Date:  2007-03       Impact factor: 11.056

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