Literature DB >> 16451028

Gas-phase deprotonation of uracil-Cu2+ and thiouracil-Cu2+ complexes.

Al Mokhtar Lamsabhi1, Manuel Alcamí, Otilia Mó, Manuel Yáñez, Jeanine Tortajada.   

Abstract

The deprotonation of Cu2+ complexes with uracil, 2-thiouracil, 4-thiouracil, and 2,4-dithiouracil has been investigated by means of B3LYP/ 6-311+G(2df,2p)//6-31G(d) calculations. The most stable [(uracil-H)Cu]+ and [(thiouracil-H)Cu]+ complexes correspond to bidentate structures in which Cu interacts with the deprotonated ring-nitrogen atom and with the oxygen or the sulfur atom of the adjacent carbonyl or thiocarbonyl group. For 2- and 4-thiouracil derivatives, the structures in which the metal cation interacts with the thiocarbonyl group are clearly favored with respect to those in which Cu interacts with the carbonyl group. This is at variance with what was found to be the most stable structure of the corresponding Cu2+ complexes, where association to the carbonyl oxygen was always preferred over the association to the thiocarbonyl group. The [(uracil-H)Cu]+ and [(thiouracil-H)Cu]+ complexes can be viewed as the result of Cu+ attachment to the uracil-H and thiouracil-H radicals formed by the deprotonation of the corresponding uracil+* and thiouracil+* radical cations. As a matter of fact their relative stability is dictated by the intrinsic stability of the corresponding uracil-H and thiouracil-H radical and by the fact that, in general, the N3-deprotonated site is a better electron donor than the N1. In all complexes, the bonding of Cu both to nitrogen and sulfur and to nitrogen and oxygen has a significantly large covalent character.

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Year:  2006        PMID: 16451028     DOI: 10.1021/jp055163u

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  8 in total

1.  Gas-phase interactions between lead(II) ions and thiouracil nucleobases: a combined experimental and theoretical study.

Authors:  Jean-Yves Salpin; Sébastien Guillaumont; Jeanine Tortajada; Al Mokhtar Lamsabhi
Journal:  J Am Soc Mass Spectrom       Date:  2008-10-30       Impact factor: 3.109

2.  A quantum-chemical study of the binding ability of βXaaHisGlyHis towards copper(II) ion.

Authors:  Zaneta Czyżnikowska; Justyna Brasuń
Journal:  J Mol Model       Date:  2011-07-15       Impact factor: 1.810

3.  Hydration energies of protonated and sodiated thiouracils.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2014-10-01       Impact factor: 3.109

4.  Quantum chemical investigations of AlN-doped C60 for use as a nano-biosensor in detection of mispairing between DNA bases.

Authors:  Shamoon Ahmad Siddiqui; Nadir Bouarissa; Tabish Rasheed; A Al-Hajry
Journal:  J Biosci       Date:  2014-12       Impact factor: 1.826

5.  Complexes of arzanol with a Cu2+ ion: a DFT study.

Authors:  Liliana Mammino
Journal:  J Mol Model       Date:  2017-09-12       Impact factor: 1.810

6.  Investigation of the antioxidant properties of hyperjovinol A through its Cu(II) coordination ability.

Authors:  Liliana Mammino
Journal:  J Mol Model       Date:  2012-12-05       Impact factor: 1.810

7.  On the nature of the interaction of copper hydride and halide with substituted ethylene and acetylene.

Authors:  Serra Arslancan; Barbara Herrera; Al Mokhtar Lamsabhi
Journal:  J Mol Model       Date:  2020-02-22       Impact factor: 1.810

8.  Microhydration of Deprotonated Nucleobases.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2016-05-13       Impact factor: 3.109

  8 in total

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