Literature DB >> 16445978

Mathematical modeling of calcium homeostasis in yeast cells.

Jiangjun Cui1, Jaap A Kaandorp.   

Abstract

In this study, based on currently available experimental observations on protein level, we constructed a mathematical model to describe calcium homeostasis in normally growing yeast cells (Saccharomyces cerevisiae). Simulation results show that tightly controlled low cytosolic calcium ion level can be a natural result under the general mechanism of gene expression feedback control. The calmodulin (a sensor protein) behavior in our model cell agrees well with relevant observations in real cells. Moreover, our model can qualitatively reproduce the experimentally observed response curve of real yeast cell responding to step-like disturbance in extracellular calcium ion concentration. Further investigations show that the feedback control mechanism in our model is as robust as it is in real cells.

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Year:  2006        PMID: 16445978     DOI: 10.1016/j.ceca.2005.12.001

Source DB:  PubMed          Journal:  Cell Calcium        ISSN: 0143-4160            Impact factor:   6.817


  10 in total

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Authors:  Shuyuan Liu; Yinglong Hou; Weiguo Liu; Chunyan Lu; Weixin Wang; Shujuan Sun
Journal:  Eukaryot Cell       Date:  2015-01-30

2.  Simulating calcium influx and free calcium concentrations in yeast.

Authors:  Jiangjun Cui; Jaap A Kaandorp; Olufisayo O Ositelu; Veronica Beaudry; Alicia Knight; Yves F Nanfack; Kyle W Cunningham
Journal:  Cell Calcium       Date:  2008-09-10       Impact factor: 6.817

3.  Profilin is required for Ca2+ homeostasis and Ca2+-modulated bud formation in yeast.

Authors:  Mitsunori Yoshida; Shinsuke Ohnuki; Yoko Yashiroda; Yoshikazu Ohya
Journal:  Mol Genet Genomics       Date:  2013-05-26       Impact factor: 3.291

4.  Calcineurin and Calcium Channel CchA Coordinate the Salt Stress Response by Regulating Cytoplasmic Ca2+ Homeostasis in Aspergillus nidulans.

Authors:  Sha Wang; Xiao Liu; Hui Qian; Shizhu Zhang; Ling Lu
Journal:  Appl Environ Microbiol       Date:  2016-05-16       Impact factor: 4.792

5.  An age-dependent feedback control model of calcium dynamics in yeast cells.

Authors:  Fusheng Tang; Weijiu Liu
Journal:  J Math Biol       Date:  2009-08-12       Impact factor: 2.259

6.  Identification of longevity genes with systems biology approaches.

Authors:  Yuanyou Tan; John M Bush; Weijiu Liu; Fusheng Tang
Journal:  Adv Appl Bioinform Chem       Date:  2009-02-27

Review 7.  Quantitative description of ion transport via plasma membrane of yeast and small cells.

Authors:  Vadim Volkov
Journal:  Front Plant Sci       Date:  2015-06-11       Impact factor: 5.753

8.  A Self-Controlled and Self-Healing Model of Bacterial Cells.

Authors:  Max Garzon; Petr Sosik; Jan Drastík; Omar Skalli
Journal:  Membranes (Basel)       Date:  2022-06-30

9.  Simulating in vitro transcriptional response of zinc homeostasis system in Escherichia coli.

Authors:  Jiangjun Cui; Jaap A Kaandorp; Catherine M Lloyd
Journal:  BMC Syst Biol       Date:  2008-10-24

10.  Systematic analysis of Ca2+ homeostasis in Saccharomyces cerevisiae based on chemical-genetic interaction profiles.

Authors:  Farzan Ghanegolmohammadi; Mitsunori Yoshida; Shinsuke Ohnuki; Yuko Sukegawa; Hiroki Okada; Keisuke Obara; Akio Kihara; Kuninori Suzuki; Tetsuya Kojima; Nozomu Yachie; Dai Hirata; Yoshikazu Ohya
Journal:  Mol Biol Cell       Date:  2017-05-31       Impact factor: 4.138

  10 in total

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