Literature DB >> 16445744

Homology effects in Neurospora crassa.

Caterina Catalanotto1, Tony Nolan, Carlo Cogoni.   

Abstract

It has become clear in the past few years that eukaryotic organisms possess different genetic systems to counter viruses, transposons and other repeated elements such as transgenes that could otherwise accumulate in the genome. In addition to serving as a model organism for genetic, biochemical and molecular studies, Neurospora crassa has proved to be a paradigm for the study of gene-silencing mechanisms. Indeed, its genome can be protected from expansion of selfish nucleic acids by a variety of mechanisms that inactivate duplicated sequences. Studies of these mechanisms have made a fundamental contribution to the understanding of the gene-silencing field.

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Year:  2006        PMID: 16445744     DOI: 10.1111/j.1574-6968.2005.00037.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  25 in total

1.  In vitro activities of the multifunctional RNA silencing polymerase QDE-1 of Neurospora crassa.

Authors:  Antti P Aalto; Minna M Poranen; Jonathan M Grimes; David I Stuart; Dennis H Bamford
Journal:  J Biol Chem       Date:  2010-07-20       Impact factor: 5.157

2.  QIP, a protein that converts duplex siRNA into single strands, is required for meiotic silencing by unpaired DNA.

Authors:  Hua Xiao; William G Alexander; Thomas M Hammond; Erin C Boone; Tony D Perdue; Patricia J Pukkila; Patrick K T Shiu
Journal:  Genetics       Date:  2010-06-15       Impact factor: 4.562

3.  QIP, a putative exonuclease, interacts with the Neurospora Argonaute protein and facilitates conversion of duplex siRNA into single strands.

Authors:  Mekhala Maiti; Heng-Chi Lee; Yi Liu
Journal:  Genes Dev       Date:  2007-02-20       Impact factor: 11.361

Review 4.  The piRNA Pathway Guards the Germline Genome Against Transposable Elements.

Authors:  Katalin Fejes Tóth; Dubravka Pezic; Evelyn Stuwe; Alexandre Webster
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

5.  Partition of Repeat-Induced Point Mutations Reveals Structural Aspects of Homologous DNA-DNA Pairing.

Authors:  Alexey K Mazur; Eugene Gladyshev
Journal:  Biophys J       Date:  2018-07-21       Impact factor: 4.033

6.  Homologous recombination as a mechanism to recognize repetitive DNA sequences in an RNAi pathway.

Authors:  Zhenyu Zhang; Shwu-Shin Chang; Zhenying Zhang; Zhihong Xue; Hanxing Zhang; Shaojie Li; Yi Liu
Journal:  Genes Dev       Date:  2013-01-15       Impact factor: 11.361

7.  Identification of small RNAs associated with meiotic silencing by unpaired DNA.

Authors:  Thomas M Hammond; William G Spollen; Logan M Decker; Sean M Blake; Gordon K Springer; Patrick K T Shiu
Journal:  Genetics       Date:  2013-03-15       Impact factor: 4.562

8.  qiRNA is a new type of small interfering RNA induced by DNA damage.

Authors:  Heng-Chi Lee; Shwu-Shin Chang; Swati Choudhary; Antti P Aalto; Mekhala Maiti; Dennis H Bamford; Yi Liu
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

9.  The DNA/RNA-dependent RNA polymerase QDE-1 generates aberrant RNA and dsRNA for RNAi in a process requiring replication protein A and a DNA helicase.

Authors:  Heng-Chi Lee; Antti P Aalto; Qiuying Yang; Shwu-Shin Chang; Guocun Huang; Daniel Fisher; Joonseok Cha; Minna M Poranen; Dennis H Bamford; Yi Liu
Journal:  PLoS Biol       Date:  2010-10-05       Impact factor: 8.029

10.  The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.

Authors:  Jeffrey J Coleman; Steve D Rounsley; Marianela Rodriguez-Carres; Alan Kuo; Catherine C Wasmann; Jane Grimwood; Jeremy Schmutz; Masatoki Taga; Gerard J White; Shiguo Zhou; David C Schwartz; Michael Freitag; Li-Jun Ma; Etienne G J Danchin; Bernard Henrissat; Pedro M Coutinho; David R Nelson; Dave Straney; Carolyn A Napoli; Bridget M Barker; Michael Gribskov; Martijn Rep; Scott Kroken; István Molnár; Christopher Rensing; John C Kennell; Jorge Zamora; Mark L Farman; Eric U Selker; Asaf Salamov; Harris Shapiro; Jasmyn Pangilinan; Erika Lindquist; Casey Lamers; Igor V Grigoriev; David M Geiser; Sarah F Covert; Esteban Temporini; Hans D Vanetten
Journal:  PLoS Genet       Date:  2009-08-28       Impact factor: 5.917

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