Literature DB >> 16445284

Global effects of the energetics of coenzyme binding: NADPH controls the protein interaction properties of human cytochrome P450 reductase.

Alex Grunau1, Mark J Paine, John E Ladbury, Aldo Gutierrez.   

Abstract

The thermodynamics of coenzyme binding to human cytochrome P450 reductase (CPR) and its isolated FAD-binding domain have been studied by isothermal titration calorimetry. Binding of 2',5'-ADP, NADP(+), and H(4)NADP, an isosteric NADPH analogue, is described in terms of the dissociation binding constant (K(d)), the enthalpy (DeltaH(B)) and entropy (TDeltaS(B)) of binding, and the heat capacity change (DeltaC(p)). This systematic approach allowed the effect of coenzyme redox state on binding to CPR to be determined. The recognition and stability of the coenzyme-CPR complex are largely determined by interaction with the adenosine moiety (K(d2)(')(,5)(')(-ADP) = 76 nM), regardless of the redox state of the nicotinamide moiety. Similar heat capacity change (DeltaC(p)) values for 2',5'-ADP (-210 cal mol(-)(1) K(-)(1)), NADP(+) (-230 cal mol(-)(1) K(-)(1)), and H(4)NADP (-220 cal mol(-)(1) K(-)(1)) indicate no significant contribution from the nicotinamide moiety to the binding interaction surface. The coenzyme binding stoichiometry to CPR is 1:1. This result validates a recently proposed one-site kinetic model [Daff, S. (2004) Biochemistry 43, 3929-3932] as opposed to a two-site model previously suggested by us [Gutierrez, A., Lian, L.-Y., Wolf, C. R., Scrutton, N. S., and Roberts, C. G. K. (2001) Biochemistry 40, 1964-1975]. Calorimetric studies in which binding of 2',5'-ADP to CPR (TDeltaS(B) = -13400 +/- 200 cal mol(-)(1), 35 degrees C) was compared with binding of the same ligand to the isolated FAD-binding domain (TDeltaS(B) = -11200 +/- 300 cal mol(-)(1), 35 degrees C) indicate that the number of accessible conformational substates of the protein increases upon 2',5'-ADP binding in the presence of the FMN-binding domain. This pattern was consistently observed along the temperature range that was studied (5-35 degrees C). This contribution of coenzyme binding energy to domain dynamics in CPR agrees with conclusions from previous temperature-jump studies [Gutierrez, A., Paine, M., Wolf, C. R., Scrutton, N. S., and Roberts, G. C. K. (2002) Biochemistry 41, 4626-4637]. A combination of calorimetry and stopped-flow spectrophotometry kinetics experiments showed that this linkage between coenzyme binding energetics and diffusional domain motion impinges directly on the molecular recognition of cytochrome c by CPR. Single-turnover reduction of cytochrome c by CPR (k(max) = 15 s(-)(1), K(d) = 37 microM) is critically coupled to coenzyme binding through ligand-induced motions that enable the FMN-binding domain to overcome a kinetically unproductive conformation. This is remarkable since the FMN-binding domain is not directly involved in coenzyme binding, the NADP(H) binding site being fully contained in the FAD-binding domain. Sequential rapid mixing measurements indicate that harnessing of coenzyme binding energy to the formation of a kinetically productive CPR-cytochrome c complex is a highly synchronized event. The inferred half-time for the decay of this productive conformation (tau(50)) is 330 +/- 70 ms only. Previously proposed structural and kinetic models are discussed in light of these findings.

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Year:  2006        PMID: 16445284     DOI: 10.1021/bi052115r

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Distinct conformational behaviors of four mammalian dual-flavin reductases (cytochrome P450 reductase, methionine synthase reductase, neuronal nitric oxide synthase, endothelial nitric oxide synthase) determine their unique catalytic profiles.

Authors:  Mohammad M Haque; Mekki Bayachou; Jesus Tejero; Claire T Kenney; Naw M Pearl; Sang-Choul Im; Lucy Waskell; Dennis J Stuehr
Journal:  FEBS J       Date:  2014-10-25       Impact factor: 5.542

2.  Structural and Kinetic Studies of Asp632 Mutants and Fully Reduced NADPH-Cytochrome P450 Oxidoreductase Define the Role of Asp632 Loop Dynamics in the Control of NADPH Binding and Hydride Transfer.

Authors:  Chuanwu Xia; Freeborn Rwere; Sangchoul Im; Anna L Shen; Lucy Waskell; Jung-Ja P Kim
Journal:  Biochemistry       Date:  2018-01-30       Impact factor: 3.162

3.  A kinetic model linking protein conformational motions, interflavin electron transfer and electron flux through a dual-flavin enzyme-simulating the reductase activity of the endothelial and neuronal nitric oxide synthase flavoprotein domains.

Authors:  Mohammad M Haque; Claire Kenney; Jesús Tejero; Dennis J Stuehr
Journal:  FEBS J       Date:  2011-09-15       Impact factor: 5.542

4.  Beta sheet 2-alpha helix C loop of cytochrome P450 reductase serves as a docking site for redox partners.

Authors:  Hyun-Hee Jang; Arvind P Jamakhandi; Shane Z Sullivan; Chul-Ho Yun; Paul F Hollenberg; Grover P Miller
Journal:  Biochim Biophys Acta       Date:  2010-02-10

5.  Kinetic and structural characterization of the interaction between the FMN binding domain of cytochrome P450 reductase and cytochrome c.

Authors:  Rui Huang; Meng Zhang; Freeborn Rwere; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Biol Chem       Date:  2014-12-15       Impact factor: 5.157

6.  Structural basis for the electron transfer from an open form of NADPH-cytochrome P450 oxidoreductase to heme oxygenase.

Authors:  Masakazu Sugishima; Hideaki Sato; Yuichiro Higashimoto; Jiro Harada; Kei Wada; Keiichi Fukuyama; Masato Noguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-03       Impact factor: 11.205

7.  Regulation of FMN subdomain interactions and function in neuronal nitric oxide synthase.

Authors:  Robielyn P Ilagan; Jesús Tejero; Kulwant S Aulak; Sougata Sinha Ray; Craig Hemann; Zhi-Qiang Wang; Mahinda Gangoda; Jay L Zweier; Dennis J Stuehr
Journal:  Biochemistry       Date:  2009-05-12       Impact factor: 3.162

8.  Differences in a conformational equilibrium distinguish catalysis by the endothelial and neuronal nitric-oxide synthase flavoproteins.

Authors:  Robielyn P Ilagan; Mauro Tiso; David W Konas; Craig Hemann; Deborah Durra; Russ Hille; Dennis J Stuehr
Journal:  J Biol Chem       Date:  2008-05-16       Impact factor: 5.157

Review 9.  Structural and mechanistic aspects of flavoproteins: electron transfer through the nitric oxide synthase flavoprotein domain.

Authors:  Dennis J Stuehr; Jesús Tejero; Mohammad M Haque
Journal:  FEBS J       Date:  2009-07-03       Impact factor: 5.542

10.  Domain motion in cytochrome P450 reductase: conformational equilibria revealed by NMR and small-angle x-ray scattering.

Authors:  Jacqueline Ellis; Aldo Gutierrez; Igor L Barsukov; Wei-Cheng Huang; J Günter Grossmann; Gordon C K Roberts
Journal:  J Biol Chem       Date:  2009-10-26       Impact factor: 5.157

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