Literature DB >> 16442180

Engineered riboswitches as novel tools in molecular biology.

Gesine Bauer1, Beatrix Suess.   

Abstract

During the last years the great importance of RNA for regulating gene expression in all organisms has become obvious. Consequently, several recent approaches aim to utilize the outstanding chemical properties of RNA to develop artificial RNA regulators for conditional gene expression systems. A combination of rational design, in vitro selection and in vivo screening systems has been used to create a versatile set of RNA based molecular switches. These tools rely on diverse mechanisms and exhibit activity in several organisms. In this review, we summarize recent developments in the application of engineered riboswitches for gene regulation in vivo.

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Year:  2006        PMID: 16442180     DOI: 10.1016/j.jbiotec.2005.12.006

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  9 in total

1.  Riboswitches in unexpected places--a synthetic riboswitch in a protein coding region.

Authors:  Shana Topp; Justin P Gallivan
Journal:  RNA       Date:  2008-10-22       Impact factor: 4.942

2.  Light-regulated RNA-small molecule interactions.

Authors:  Douglas D Young; Alexander Deiters
Journal:  Chembiochem       Date:  2008-05-23       Impact factor: 3.164

3.  Efficient Method to Identify Synthetic Riboswitches Using RNA-Based Capture-SELEX Combined with In Vivo Screening.

Authors:  Janice Kramat; Beatrix Suess
Journal:  Methods Mol Biol       Date:  2022

4.  DNA-rescuable allosteric inhibition of aptamer II ligand affinity by aptamer I element in the shortened Vibrio cholerae glycine riboswitch.

Authors:  Eileen M Sherman; Galal Elsayed; Jackie M Esquiaqui; Mohammed Elsayed; Bryan Brinda; Jing-Dong Ye
Journal:  J Biochem       Date:  2014-08-04       Impact factor: 3.387

5.  Application and analysis of structure-switching aptamers for small molecule quantification.

Authors:  Shengnan Xie; S Patrick Walton
Journal:  Anal Chim Acta       Date:  2009-02-21       Impact factor: 6.558

Review 6.  Engineering ligand-responsive gene-control elements: lessons learned from natural riboswitches.

Authors:  K H Link; R R Breaker
Journal:  Gene Ther       Date:  2009-07-09       Impact factor: 5.250

Review 7.  Progress in metabolic engineering of Saccharomyces cerevisiae.

Authors:  Elke Nevoigt
Journal:  Microbiol Mol Biol Rev       Date:  2008-09       Impact factor: 11.056

8.  MODENA: a multi-objective RNA inverse folding.

Authors:  Akito Taneda
Journal:  Adv Appl Bioinform Chem       Date:  2010-12-22

9.  Thermodynamic characterization of an engineered tetracycline-binding riboswitch.

Authors:  Michael Müller; Julia E Weigand; Oliver Weichenrieder; Beatrix Suess
Journal:  Nucleic Acids Res       Date:  2006-05-17       Impact factor: 16.971

  9 in total

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