Literature DB >> 16427003

Modified view of tRNA: stability amid sequence diversity.

David R Engelke1, Anita K Hopper.   

Abstract

In a recent issue of Molecular Cell, a report from the Phizicky lab challenges two commonly held notions regarding tRNAs: (1) tRNAs are stable molecules shielded from the machinery that cause other RNAs to have short half-lives, and (2) the many modifications found on tRNAs serve only subtle biological functions. Alexandrov et al. (2006) show that tRNA modifications can play an important role in tRNA stability, as without particular modifications, tRNA half-life can be reduced from hours to minutes by a new turnover pathway.

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Year:  2006        PMID: 16427003     DOI: 10.1016/j.molcel.2006.01.002

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  13 in total

1.  On the possible role of tRNA base modifications in the evolution of codon usage: queuosine and Drosophila.

Authors:  Ylenia Chiari; Kirstin Dion; James Colborn; Aristeidis Parmakelis; Jeffrey R Powell
Journal:  J Mol Evol       Date:  2010-03-24       Impact factor: 2.395

2.  A generic protocol for the expression and purification of recombinant RNA in Escherichia coli using a tRNA scaffold.

Authors:  Luc Ponchon; Geneviève Beauvais; Sylvie Nonin-Lecomte; Frédéric Dardel
Journal:  Nat Protoc       Date:  2009-05-28       Impact factor: 13.491

3.  The RNA degradosome promotes tRNA quality control through clearance of hypomodified tRNA.

Authors:  Satoshi Kimura; Matthew K Waldor
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-08       Impact factor: 11.205

4.  tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription.

Authors:  Anahi Molla-Herman; Ana Maria Vallés; Carine Ganem-Elbaz; Christophe Antoniewski; Jean-René Huynh
Journal:  EMBO J       Date:  2015-10-15       Impact factor: 11.598

Review 5.  A methods review on use of nonsense suppression to study 3' end formation and other aspects of tRNA biogenesis.

Authors:  Keshab Rijal; Richard J Maraia; Aneeshkumar G Arimbasseri
Journal:  Gene       Date:  2014-11-18       Impact factor: 3.688

6.  An atlas of RNA base pairs involving modified nucleobases with optimal geometries and accurate energies.

Authors:  Mohit Chawla; Romina Oliva; Janusz M Bujnicki; Luigi Cavallo
Journal:  Nucleic Acids Res       Date:  2015-06-27       Impact factor: 16.971

Review 7.  Bioengineering of noncoding RNAs for research agents and therapeutics.

Authors:  Pui Yan Ho; Ai-Ming Yu
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-01-13       Impact factor: 9.957

8.  The concept of RNA-assisted protein folding: the role of tRNA.

Authors:  Jan C Biro
Journal:  Theor Biol Med Model       Date:  2012-04-02       Impact factor: 2.432

9.  Optimization and characterization of tRNA-shRNA expression constructs.

Authors:  Lisa J Scherer; Richard Frank; John J Rossi
Journal:  Nucleic Acids Res       Date:  2007-04-10       Impact factor: 16.971

10.  Mutation of RNA Pol III subunit rpc2/polr3b Leads to Deficiency of Subunit Rpc11 and disrupts zebrafish digestive development.

Authors:  Nelson S Yee; Weilong Gong; Ying Huang; Kristin Lorent; Amy C Dolan; Richard J Maraia; Michael Pack
Journal:  PLoS Biol       Date:  2007-11       Impact factor: 8.029

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