Literature DB >> 16419101

BAC array CGH reveals genomic aberrations in idiopathic mental retardation.

Noriko Miyake1, Osamu Shimokawa, Naoki Harada, Nadia Sosonkina, Aiko Okubo, Hiroki Kawara, Nobuhiko Okamoto, Kenji Kurosawa, Hiroshi Kawame, Mie Iwakoshi, Tomoki Kosho, Yoshimitsu Fukushima, Yoshio Makita, Yuji Yokoyama, Takanori Yamagata, Mitsuhiro Kato, Yoko Hiraki, Masayo Nomura, Ko-ichiro Yoshiura, Tatsuya Kishino, Tohru Ohta, Takeshi Mizuguchi, Norio Niikawa, Naomichi Matsumoto.   

Abstract

Array using 2,173 BAC clones covering the whole human genome has been constructed. All clones spotted were confirmed to show a unique signal at the predicted chromosomal location by FISH analysis in our laboratory. A total of 30 individuals with idiopathic mental retardation (MR) were analyzed by comparative genomic hybridization using this array. Three deletions, one duplication, and one unbalanced translocation could be detected in five patients, which are likely to contribute to MR. The constructed array was shown to be an efficient tool for the detection of pathogenic genomic rearrangements in MR patients as well as copy number polymorphisms (CPNs). 2006 Wiley-Liss, Inc.

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Year:  2006        PMID: 16419101     DOI: 10.1002/ajmg.a.31098

Source DB:  PubMed          Journal:  Am J Med Genet A        ISSN: 1552-4825            Impact factor:   2.802


  17 in total

1.  Microarray comparative genomic hybridization (CGH)-based prenatal diagnosis for chromosome abnormalities using cell-free fetal DNA in amniotic fluid.

Authors:  Shoko Miura; Kiyonori Miura; Hideaki Masuzaki; Noriko Miyake; Koh-Ichiro Yoshiura; Nadiya Sosonkina; Naoki Harada; Osamu Shimokawa; Daisuke Nakayama; Shuichiro Yoshimura; Naomichi Matsumoto; Norio Niikawa; Tadayuki Ishimaru
Journal:  J Hum Genet       Date:  2006-04-19       Impact factor: 3.172

2.  Molecular karyotyping in patients with mental retardation using 100K single-nucleotide polymorphism arrays.

Authors:  Juliane Hoyer; Alexander Dreweke; Christian Becker; Ina Göhring; Christian T Thiel; Maarit M Peippo; Ralf Rauch; Michael Hofbeck; Udo Trautmann; Christiane Zweier; Martin Zenker; Ulrike Hüffmeier; Cornelia Kraus; Arif B Ekici; Franz Rüschendorf; Peter Nürnberg; André Reis; Anita Rauch
Journal:  J Med Genet       Date:  2007-06-29       Impact factor: 6.318

3.  Value for money? Array genomic hybridization for diagnostic testing for genetic causes of intellectual disability.

Authors:  Dean A Regier; Jan M Friedman; Carlo A Marra
Journal:  Am J Hum Genet       Date:  2010-04-15       Impact factor: 11.025

4.  Clinical and molecular cytogenetic characterisation of a newly recognised microdeletion syndrome involving 2p15-16.1.

Authors:  E Rajcan-Separovic; C Harvard; X Liu; B McGillivray; J G Hall; Y Qiao; J Hurlburt; J Hildebrand; E C R Mickelson; J J A Holden; M E S Lewis
Journal:  J Med Genet       Date:  2006-09-08       Impact factor: 6.318

Review 5.  Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

Authors:  David T Miller; Margaret P Adam; Swaroop Aradhya; Leslie G Biesecker; Arthur R Brothman; Nigel P Carter; Deanna M Church; John A Crolla; Evan E Eichler; Charles J Epstein; W Andrew Faucett; Lars Feuk; Jan M Friedman; Ada Hamosh; Laird Jackson; Erin B Kaminsky; Klaas Kok; Ian D Krantz; Robert M Kuhn; Charles Lee; James M Ostell; Carla Rosenberg; Stephen W Scherer; Nancy B Spinner; Dimitri J Stavropoulos; James H Tepperberg; Erik C Thorland; Joris R Vermeesch; Darrel J Waggoner; Michael S Watson; Christa Lese Martin; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

Review 6.  Fruit flies and intellectual disability.

Authors:  François V Bolduc; Tim Tully
Journal:  Fly (Austin)       Date:  2009-01-12       Impact factor: 2.160

7.  MLPA for confirmation of array CGH results and determination of inheritance.

Authors:  Alison Hills; Joo Wook Ahn; Celia Donaghue; Helen Thomas; Kathy Mann; Caroline Mackie Ogilvie
Journal:  Mol Cytogenet       Date:  2010-10-13       Impact factor: 2.009

8.  Microarray comparative genomic hybridization analysis of 59 patients with schizophrenia.

Authors:  Takeshi Mizuguchi; Ryota Hashimoto; Masanari Itokawa; Akira Sano; Osamu Shimokawa; Yukiko Yoshimura; Naoki Harada; Noriko Miyake; Akira Nishimura; Hirotomo Saitsu; Nadiya Sosonkina; Norio Niikawa; Hiroshi Kunugi; Naomichi Matsumoto
Journal:  J Hum Genet       Date:  2008-08-07       Impact factor: 3.172

9.  High frequency of common DNA copy number abnormalities detected by bacterial artificial chromosome array comparative genomic hybridization in 24 breast cancer cell lines.

Authors:  Soichiro Saito; Keiko Morita; Takashi Hirano
Journal:  Hum Cell       Date:  2009-02       Impact factor: 4.174

10.  BAC array CGH in patients with Velocardiofacial syndrome-like features reveals genomic aberrations on chromosome region 1q21.1.

Authors:  Anna Brunet; Lluís Armengol; Damià Heine; Jordi Rosell; Manel García-Aragonés; Elisabeth Gabau; Xavier Estivill; Miriam Guitart
Journal:  BMC Med Genet       Date:  2009-12-23       Impact factor: 2.103

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