Literature DB >> 16415343

Ionic contacts at DnaK substrate binding domain involved in the allosteric regulation of lid dynamics.

Vanesa Fernández-Sáiz1, Fernando Moro, Jesus M Arizmendi, Sergio P Acebrón, Arturo Muga.   

Abstract

To gain further insight into the interactions involved in the allosteric transition of DnaK we have characterized wild-type (wt) protein and three mutants in which ionic interactions at the interface between the two subdomains of the substrate binding domain, and within the lid subdomain have been disrupted. Our data show that ionic contacts, most likely forming an electrically charged network, between the N-terminal region of helix B and an inner loop of the beta-sandwich are involved in maintaining the position of the lid relative to the beta-subdomain in the ADP state but not in the ATP state of the protein. Disruption of the ionic interactions between the C-terminal region of helix B and the outer loops of the beta-sandwich, known as the latch, does not have the same conformational consequences but results equally in an inactive protein. This indicates that a variety of mechanisms can inactivate this complex allosteric machine. Our results identify the ionic contacts at the subdomain and interdomain interfaces that are part of the hinge region involved in the ATP-induced allosteric displacement of the lid away from the peptide binding site. These interactions also stabilize peptide-Hsp70 complexes at physiological (37 degrees C) and stress (42 degrees C) temperatures, a requirement for productive substrate (re)folding.

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Year:  2006        PMID: 16415343     DOI: 10.1074/jbc.M512744200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  24 in total

1.  Unique peptide substrate binding properties of 110-kDa heat-shock protein (Hsp110) determine its distinct chaperone activity.

Authors:  Xinping Xu; Evans Boateng Sarbeng; Christina Vorvis; Divya Prasanna Kumar; Lei Zhou; Qinglian Liu
Journal:  J Biol Chem       Date:  2011-12-08       Impact factor: 5.157

2.  Nucleoplasmin binds histone H2A-H2B dimers through its distal face.

Authors:  Isbaal Ramos; Jaime Martín-Benito; Ron Finn; Laura Bretaña; Kerman Aloria; Jesús M Arizmendi; Juan Ausió; Arturo Muga; José M Valpuesta; Adelina Prado
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Review 3.  Mechanisms of the Hsp70 chaperone system.

Authors:  Jason C Young
Journal:  Biochem Cell Biol       Date:  2010-04       Impact factor: 3.626

4.  J domain co-chaperone specificity defines the role of BiP during protein translocation.

Authors:  Shruthi S Vembar; Martin C Jonikas; Linda M Hendershot; Jonathan S Weissman; Jeffrey L Brodsky
Journal:  J Biol Chem       Date:  2010-04-29       Impact factor: 5.157

5.  Hsp70 chaperone ligands control domain association via an allosteric mechanism mediated by the interdomain linker.

Authors:  Joanna F Swain; Gizem Dinler; Renuka Sivendran; Diana L Montgomery; Mathias Stotz; Lila M Gierasch
Journal:  Mol Cell       Date:  2007-04-13       Impact factor: 17.970

6.  Mechanics of Hsp70 chaperones enables differential interaction with client proteins.

Authors:  Rainer Schlecht; Annette H Erbse; Bernd Bukau; Matthias P Mayer
Journal:  Nat Struct Mol Biol       Date:  2011-01-30       Impact factor: 15.369

7.  A functional DnaK dimer is essential for the efficient interaction with Hsp40 heat shock protein.

Authors:  Evans Boateng Sarbeng; Qingdai Liu; Xueli Tian; Jiao Yang; Hongtao Li; Jennifer Li Wong; Lei Zhou; Qinglian Liu
Journal:  J Biol Chem       Date:  2015-01-28       Impact factor: 5.157

8.  Novel Entropically Driven Conformation-specific Interactions with Tomm34 Protein Modulate Hsp70 Protein Folding and ATPase Activities.

Authors:  Michal Durech; Filip Trcka; Petr Man; Elizabeth A Blackburn; Lenka Hernychova; Petra Dvorakova; Dominika Coufalova; Daniel Kavan; Borivoj Vojtesek; Petr Muller
Journal:  Mol Cell Proteomics       Date:  2016-03-04       Impact factor: 5.911

9.  Human Stress-inducible Hsp70 Has a High Propensity to Form ATP-dependent Antiparallel Dimers That Are Differentially Regulated by Cochaperone Binding.

Authors:  Filip Trcka; Michal Durech; Pavla Vankova; Josef Chmelik; Veronika Martinkova; Jiri Hausner; Alan Kadek; Julien Marcoux; Tomas Klumpler; Borivoj Vojtesek; Petr Muller; Petr Man
Journal:  Mol Cell Proteomics       Date:  2018-11-20       Impact factor: 5.911

10.  An interdomain energetic tug-of-war creates the allosterically active state in Hsp70 molecular chaperones.

Authors:  Anastasia Zhuravleva; Eugenia M Clerico; Lila M Gierasch
Journal:  Cell       Date:  2012-12-07       Impact factor: 41.582

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