Literature DB >> 16413254

Bioinformatic "Harvester": a search engine for genome-wide human, mouse, and rat protein resources.

Urban Liebel1, Bjoern Kindler, Rainer Pepperkok.   

Abstract

Harvester is a meta search engine for gene and protein information. It searches 16 major databases and prediction servers and combines the results on pregenerated HTML pages. In this way Harvester can provide comprehensive gene-protein information from different servers in a convenient and fast manner. The Harvester search engine works similar to Google, offering genome-wide ranked results at very high speed. Here we describe how to use this bioinformatic tool along with selected examples.

Entities:  

Mesh：

Year:  2005        PMID： 16413254     DOI： 10.1016/S0076-6879(05)04003-6

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


  6 in total

1.  Association of SLC34A2 variation and sodium-lithium countertransport activity in humans and baboons.

Authors:  Xiaojing Zheng; Candace M Kammerer; Laura A Cox; Alanna Morrison; Stephen T Turner; Robert E Ferrell
Journal:  Am J Hypertens       Date:  2009-01-01       Impact factor: 2.689

2.  Transcriptome analysis of human immune responses following live vaccine strain (LVS) Francisella tularensis vaccination.

Authors:  Claudette L Fuller; Katherine C Brittingham; Mark W Porter; Matthew J Hepburn; Patricia L Petitt; Phillip R Pittman; Sina Bavari
Journal:  Mol Immunol       Date:  2007-03-08       Impact factor: 4.407

3.  The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored.

Authors:  Damian Szklarczyk; Andrea Franceschini; Michael Kuhn; Milan Simonovic; Alexander Roth; Pablo Minguez; Tobias Doerks; Manuel Stark; Jean Muller; Peer Bork; Lars J Jensen; Christian von Mering
Journal:  Nucleic Acids Res       Date:  2010-11-02       Impact factor: 16.971

4.  Michigan molecular interactions r2: from interacting proteins to pathways.

Authors:  V Glenn Tarcea; Terry Weymouth; Alex Ade; Aaron Bookvich; Jing Gao; Vasudeva Mahavisno; Zach Wright; Adriane Chapman; Magesh Jayapandian; Arzucan Ozgür; Yuanyuan Tian; Jim Cavalcoli; Barbara Mirel; Jignesh Patel; Dragomir Radev; Brian Athey; David States; H V Jagadish
Journal:  Nucleic Acids Res       Date:  2008-10-31       Impact factor: 16.971

5.  CARGO: a web portal to integrate customized biological information.

Authors:  Ildefonso Cases; David G Pisano; Eduardo Andres; Angel Carro; José M Fernández; Gonzalo Gómez-López; Jose M Rodriguez; Jaime F Vera; Alfonso Valencia; Ana M Rojas
Journal:  Nucleic Acids Res       Date:  2007-05-05       Impact factor: 16.971

Review 6.  What's that gene (or protein)? Online resources for exploring functions of genes, transcripts, and proteins.

Authors:  James R A Hutchins
Journal:  Mol Biol Cell       Date:  2014-04       Impact factor: 4.138
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.