Literature DB >> 16411748

Determinants of cooperativity and site selectivity in human ileal bile acid binding protein.

Orsolya Toke1, John D Monsey, Gregory T DeKoster, Gregory P Tochtrop, Changguo Tang, David P Cistola.   

Abstract

Human ileal bile acid binding protein (I-BABP) is a member of the family of intracellular lipid-binding proteins and is thought to play a role in the enterohepatic circulation of bile salts. Our group has previously shown that human I-BABP binds two molecules of glycocholate (GCA) with low intrinsic affinity but an extraordinary high degree of positive cooperativity. Besides the strong positive cooperativity, human I-BABP exhibits a high degree of site selectivity in its interactions with GCA and glycochenodeoxycholate (GCDA), the two major bile salts in humans. In this study, on the basis of our first generation nuclear magnetic resonance (NMR) structure of the ternary complex of human I-BABP with GCA and GCDA, we introduced single-residue mutations at certain key positions in the binding pocket that might disrupt a hydrogen-bonding network, a likely way of energetic communication between the two sites. Macroscopic binding parameters were determined using isothermal titration calorimetry, and site selectivity was monitored by NMR spectroscopy of isotopically enriched bile salts. According to our results, cooperativity and site selectivity are not linked in human I-BABP. While cooperativity is governed by a subtle interplay of entropic and enthalpic contributions, site selectivity appears to be determined by more localized enthalpic effects. Possible communication pathways between the two binding sites are discussed.

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Year:  2006        PMID: 16411748     DOI: 10.1021/bi051781p

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  Studying multisite binary and ternary protein interactions by global analysis of isothermal titration calorimetry data in SEDPHAT: application to adaptor protein complexes in cell signaling.

Authors:  Jon C D Houtman; Patrick H Brown; Brent Bowden; Hiroshi Yamaguchi; Ettore Appella; Lawrence E Samelson; Peter Schuck
Journal:  Protein Sci       Date:  2007-01       Impact factor: 6.725

2.  Structural requirements for cooperativity in ileal bile acid-binding proteins.

Authors:  Serena Zanzoni; Michael Assfalg; Alejandro Giorgetti; Mariapina D'Onofrio; Henriette Molinari
Journal:  J Biol Chem       Date:  2011-09-14       Impact factor: 5.157

Review 3.  Intestinal Absorption of Bile Acids in Health and Disease.

Authors:  Alexander L Ticho; Pooja Malhotra; Pradeep K Dudeja; Ravinder K Gill; Waddah A Alrefai
Journal:  Compr Physiol       Date:  2019-12-18       Impact factor: 9.090

Review 4.  Bile acid transporters: structure, function, regulation and pathophysiological implications.

Authors:  Waddah A Alrefai; Ravinder K Gill
Journal:  Pharm Res       Date:  2007-04-03       Impact factor: 4.200

5.  Unusual binding of ursodeoxycholic acid to ileal bile acid binding protein: role in activation of FXRα.

Authors:  Changming Fang; Fabian V Filipp; Jeffrey W Smith
Journal:  J Lipid Res       Date:  2012-01-05       Impact factor: 5.922

Review 6.  Analysis of cooperativity by isothermal titration calorimetry.

Authors:  Alan Brown
Journal:  Int J Mol Sci       Date:  2009-08-04       Impact factor: 5.923

Review 7.  Deciphering the nuclear bile acid receptor FXR paradigm.

Authors:  Salvatore Modica; Raffaella M Gadaleta; Antonio Moschetta
Journal:  Nucl Recept Signal       Date:  2010-11-19

8.  Role of bile salt in regulating Mcl-1 phosphorylation and chemoresistance in hepatocellular carcinoma cells.

Authors:  Mingmei Liao; Jinfeng Zhao; Ton Wang; Jinghua Duan; Yangde Zhang; Xingming Deng
Journal:  Mol Cancer       Date:  2011-04-20       Impact factor: 27.401

Review 9.  Bile acid binding protein: a versatile host of small hydrophobic ligands for applications in the fields of MRI contrast agents and bio-nanomaterials.

Authors:  Katiuscia Pagano; Simona Tomaselli; Serena Zanzoni; Michael Assfalg; Henriette Molinari; Laura Ragona
Journal:  Comput Struct Biotechnol J       Date:  2013-12-08       Impact factor: 7.271

10.  Positive Cooperativity in Substrate Binding by Human Thymidylate Synthase.

Authors:  Jeffrey P Bonin; Paul J Sapienza; Emily Wilkerson; Dennis Goldfarb; Li Wang; Laura Herring; Xian Chen; Michael B Major; Andrew L Lee
Journal:  Biophys J       Date:  2019-08-22       Impact factor: 3.699

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