Literature DB >> 16407275

Phosphodiesterase-5 Gln817 is critical for cGMP, vardenafil, or sildenafil affinity: its orientation impacts cGMP but not cAMP affinity.

Roya Zoraghi1, Jackie D Corbin, Sharron H Francis.   

Abstract

The side group of an invariant Gln in cGMP- and cAMP-specific phosphodiesterases (PDE) is held in different orientations by bonds with other amino acids and purportedly discriminates between guanine and adenine in cGMP and cAMP. In cGMP-specific PDE5, Gln(775) constrains the orientation of the invariant Gln(817) side chain, which forms bidentate bonds with 5'-GMP, vardenafil, sildenafil, and 3-isobutyl-1-methylxanthine (IBMX) (Sung, B. J., Hwang, K. Y., Jeon, Y. H., Lee, J. I., Heo, Y. S., Kim, J. H., Moon, J., Yoon, J. M., Hyun, Y. L., Kim, E., Eum, S. J., Park, S. Y., Lee, J. O., Lee, T. G., Ro, S., and Cho, J. M. (2003) Nature 425, 98-102; Huai, Q., Liu, Y., Francis, S. H., Corbin, J. D., and Ke, H. (2004) J. Biol. Chem. 279, 13095-13101; Zhang, K. Y., Card, G. L., Suzuki, Y., Artis, D. R., Fong, D., Gillette, S., Hsieh, D., Neiman, J., West, B. L., Zhang, C., Milburn, M. V., Kim, S. H., Schlessinger, J., and Bollag, G. (2004) Mol. Cell 15, 279-286). PDE5(Q817A) and PDE5(Q775A) were generated to test the hypotheses that Gln(817) is critical for cyclic nucleotide or inhibitor affinity and that Gln(775) immobilizes the Gln(817) side chain to provide cGMP/cAMP selectivity. Allosteric cGMP binding and the molecular mass of the mutant proteins were unchanged compared with PDE5(WT). For PDE5(Q817A), K(m) for cGMP or cAMP was weakened 60- or 2-fold, respectively. For PDE5(Q775A), K(m) for cGMP was weakened approximately 20-fold but was unchanged for cAMP. For PDE5(Q817A), vardenafil, sildenafil, and IBMX inhibitory potencies were weakened 610-, 48-, and 60-fold, respectively, indicating that Gln(817) is a major determinant of potency, especially for vardenafil, and that binding of vardenafil and sildenafil differs substantially. Sildenafil and vardenafil affinity were not significantly affected in PDE5(Q775A). It is concluded that Gln(817) is a positive determinant for PDE5 affinity for cGMP and several inhibitors; Gln(775), which perhaps restricts rotation of Gln(817) side chain, is critical for cGMP affinity but has no measurable effect on affinity for cAMP, sildenafil, or vardenafil.

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Year:  2006        PMID: 16407275     DOI: 10.1074/jbc.M510372200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  13 in total

1.  Synthesis and molecular modeling of novel tetrahydro-β-carboline derivatives with phosphodiesterase 5 inhibitory and anticancer properties.

Authors:  Heba A Mohamed; Nancy M R Girgis; Rainer Wilcken; Matthias R Bauer; Heather N Tinsley; Bernard D Gary; Gary A Piazza; Frank M Boeckler; Ashraf H Abadi
Journal:  J Med Chem       Date:  2010-12-28       Impact factor: 7.446

2.  Characterization of the structures of phosphodiesterase 10 binding with adenosine 3',5'-monophosphate and guanosine 3',5'-monophosphate by hybrid quantum mechanical/molecular mechanical calculations.

Authors:  Haiting Lu; Alan C Goren; Chang-Guo Zhan
Journal:  J Phys Chem B       Date:  2010-05-27       Impact factor: 2.991

3.  A novel sulindac derivative that potently suppresses colon tumor cell growth by inhibiting cGMP phosphodiesterase and β-catenin transcriptional activity.

Authors:  Jason D Whitt; Nan Li; Heather N Tinsley; Xi Chen; Wei Zhang; Yonghe Li; Bernard D Gary; Adam B Keeton; Yaguang Xi; Ashraf H Abadi; William E Grizzle; Gary A Piazza
Journal:  Cancer Prev Res (Phila)       Date:  2012-05-03

4.  Catalytic Domains of Phosphodiesterase 5, 6, and 5/6 Chimera Display Differential Dynamics and Ligand Dissociation Energy Barriers.

Authors:  Jason G Pattis; Shaan Kamal; Boyang Li; Eric R May
Journal:  J Phys Chem B       Date:  2019-01-22       Impact factor: 2.991

5.  Structural insight into substrate specificity of phosphodiesterase 10.

Authors:  Huanchen Wang; Yudong Liu; Jing Hou; Meiyan Zheng; Howard Robinson; Hengming Ke
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-26       Impact factor: 11.205

6.  Which phosphodiesterase can decrease cardiac effects of 5-HT4 receptor activation in transgenic mice?

Authors:  Joachim Neumann; Benedikt Käufler; Ulrich Gergs
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2019-04-24       Impact factor: 3.000

7.  Interactions between cyclic nucleotide phosphodiesterase 11 catalytic site and substrates or tadalafil and role of a critical Gln-869 hydrogen bond.

Authors:  James L Weeks; Jackie D Corbin; Sharron H Francis
Journal:  J Pharmacol Exp Ther       Date:  2009-07-29       Impact factor: 4.030

8.  Design of novel β-carboline derivatives with pendant 5-bromothienyl and their evaluation as phosphodiesterase-5 inhibitors.

Authors:  Dalia S El-Gamil; Nermin S Ahmed; Bernard D Gary; Gary A Piazza; Matthias Engel; Rolf W Hartmann; Ashraf H Abadi
Journal:  Arch Pharm (Weinheim)       Date:  2013-01       Impact factor: 3.751

9.  Structural asymmetry of phosphodiesterase-9, potential protonation of a glutamic acid, and role of the invariant glutamine.

Authors:  Jing Hou; Jie Xu; Ming Liu; Ruizhi Zhao; Hai-Bin Luo; Hengming Ke
Journal:  PLoS One       Date:  2011-03-31       Impact factor: 3.240

10.  The molecular basis for different recognition of substrates by phosphodiesterase families 4 and 10.

Authors:  Huanchen Wang; Howard Robinson; Hengming Ke
Journal:  J Mol Biol       Date:  2007-05-26       Impact factor: 5.469

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