Literature DB >> 16401085

Slow ligand binding kinetics dominate ferrous hexacoordinate hemoglobin reactivities and reveal differences between plants and other species.

Benoit J Smagghe1, Gautam Sarath, Emily Ross, Jean-Louis Hilbert, Mark S Hargrove.   

Abstract

Hexacoordinate hemoglobins are found in many living organisms ranging from prokaryotes to plants and animals. They are named "hexacoordinate" because of reversible coordination of the heme iron by a histidine side chain located in the heme pocket. This endogenous coordination competes with exogenous ligand binding and causes multiphasic relaxation time courses following rapid mixing or flash photolysis experiments. Previous rapid mixing studies have assumed a steady-state relationship between hexacoordination and exogenous ligand binding that does not correlate with observed time courses for binding. Here, we demonstrate that this assumption is not valid for some hexacoordinate hemoglobins, and that multiphasic time courses are due to an appreciable fraction of pentacoordinate heme resulting from relatively small equilibrium constants for hexacoordination (K(H)). CO binding reactions initiated by rapid mixing are measured for four plant hexacoordinate hemoglobins, human neuroglobin and cytoglobin, and Synechocystis hemoglobin. The plant proteins, while showing a surprising degree of variability, differ from the others in having much lower values of K(H). Neuroglobin and cytoglobin display dramatic biphasic time courses for CO binding that have not been observed using other techniques. Finally, an independent spectroscopic quantification of K(H) is presented that complements rapid mixing for the investigation of hexacoordination. These results demonstrate that hexacoordination could play a much larger role in regulating affinity constants for ligand binding in human neuroglobin and cytoglobin than in the plant hexacoordinate hemoglobins.

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Year:  2006        PMID: 16401085     DOI: 10.1021/bi051902l

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  26 in total

Review 1.  Structure and reactivity of hexacoordinate hemoglobins.

Authors:  Smita Kakar; Federico G Hoffman; Jay F Storz; Marian Fabian; Mark S Hargrove
Journal:  Biophys Chem       Date:  2010-09-21       Impact factor: 2.352

2.  Dynamic features of carboxy cytoglobin distal mutants investigated by molecular dynamics simulations.

Authors:  Cong Zhao; Weihong Du
Journal:  J Biol Inorg Chem       Date:  2016-02-03       Impact factor: 3.358

3.  Effects of distal mutation on the dynamic properties of carboxycytoglobin: a molecular dynamics simulation study.

Authors:  Cong Zhao; Bingbing Zhang; Weihong Du
Journal:  J Biol Inorg Chem       Date:  2013-09-14       Impact factor: 3.358

4.  Covalent heme attachment in Synechocystis hemoglobin is required to prevent ferrous heme dissociation.

Authors:  Julie A Hoy; Benoit J Smagghe; Puspita Halder; Mark S Hargrove
Journal:  Protein Sci       Date:  2007-02       Impact factor: 6.725

5.  Significantly enhanced heme retention ability of myoglobin engineered to mimic the third covalent linkage by nonaxial histidine to heme (vinyl) in synechocystis hemoglobin.

Authors:  Sheetal Uppal; Shikha Salhotra; Nitika Mukhi; Fatima Kamal Zaidi; Manas Seal; Somdatta Ghosh Dey; Rajiv Bhat; Suman Kundu
Journal:  J Biol Chem       Date:  2014-12-01       Impact factor: 5.157

6.  Proximal influences in two-on-two globins: effect of the Ala69Ser replacement on Synechocystis sp. PCC 6803 hemoglobin.

Authors:  Jane A Knappenberger; Syna A Kuriakose; B Christie Vu; Henry J Nothnagel; David A Vuletich; Juliette T J Lecomte
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

7.  Chemical reactivity of Synechococcus sp. PCC 7002 and Synechocystis sp. PCC 6803 hemoglobins: covalent heme attachment and bishistidine coordination.

Authors:  Henry J Nothnagel; Matthew R Preimesberger; Matthew P Pond; Benjamin Y Winer; Emily M Adney; Juliette T J Lecomte
Journal:  J Biol Inorg Chem       Date:  2011-01-15       Impact factor: 3.358

8.  Immunolocalization of non-symbiotic hemoglobins during somatic embryogenesis in chicory.

Authors:  Benoît J Smagghe; Anne-Sophie Blervacq; Christelle Blassiau; Jean-Pierre Decottignies; Jean-Pierre Jacquot; Mark S Hargrove; Jean-Louis Hilbert
Journal:  Plant Signal Behav       Date:  2007-01

9.  Molecular dynamics simulation of a carboxy murine neuroglobin mutated on the proximal side: heme displacement and concomitant rearrangement in loop regions.

Authors:  Jia Xu; Guowei Yin; Feijuan Huang; Baohuai Wang; Weihong Du
Journal:  J Mol Model       Date:  2009-10-08       Impact factor: 1.810

10.  Covalent attachment of the heme to Synechococcus hemoglobin alters its reactivity toward nitric oxide.

Authors:  Matthew R Preimesberger; Eric A Johnson; Dillon B Nye; Juliette T J Lecomte
Journal:  J Inorg Biochem       Date:  2017-09-22       Impact factor: 4.155

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