Literature DB >> 16385072

Whole-genome comparison between Photorhabdus strains to identify genomic regions involved in the specificity of nematode interaction.

S Gaudriault1, E Duchaud, A Lanois, A-S Canoy, S Bourot, R Derose, F Kunst, N Boemare, A Givaudan.   

Abstract

The bacterium Photorhabdus establishes a highly specific association with Heterorhabditis, its nematode host. Photorhabdus strains associated with Heterorhabditis bacteriophora or Heterorhabditis megidis were compared using a Photorhabdus DNA microarray. We describe 31 regions belonging to the Photorhabdus flexible gene pool. Distribution analysis of regions among the Photorhabdus genus identified loci possibly involved in nematode specificity.

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Year:  2006        PMID： 16385072      PMCID： PMC1347316          DOI： 10.1128/JB.188.2.809-814.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  22 in total

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2.  Lsr-mediated transport and processing of AI-2 in Salmonella typhimurium.

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3.  CAAT-Box, Contigs-Assembly and Annotation Tool-Box for genome sequencing projects.

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4.  A model-based analysis of microarray experimental error and normalisation.

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5.  The LuxS-dependent autoinducer AI-2 controls the expression of an ABC transporter that functions in AI-2 uptake in Salmonella typhimurium.

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6.  A hexA homologue from Photorhabdus regulates pathogenicity, symbiosis and phenotypic variation.

Authors:  Susan A Joyce; David J Clarke
Journal:  Mol Microbiol       Date:  2003-03       Impact factor: 3.501

7.  Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis.

Authors:  Stewart J Hinchliffe; Karen E Isherwood; Richard A Stabler; Michael B Prentice; Alexander Rakin; Richard A Nichols; Petra C F Oyston; Jason Hinds; Richard W Titball; Brendan W Wren
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Review 8.  Human infection with Photorhabdus asymbiotica: an emerging bacterial pathogen.

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Journal:  Microbes Infect       Date:  2004-02       Impact factor: 2.700

9.  The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens.

Authors:  Eric Duchaud; Christophe Rusniok; Lionel Frangeul; Carmen Buchrieser; Alain Givaudan; Séad Taourit; Stéphanie Bocs; Caroline Boursaux-Eude; Michael Chandler; Jean-François Charles; Elie Dassa; Richard Derose; Sylviane Derzelle; Georges Freyssinet; Sophie Gaudriault; Claudine Médigue; Anne Lanois; Kerrie Powell; Patricia Siguier; Rachel Vincent; Vincent Wingate; Mohamed Zouine; Philippe Glaser; Noël Boemare; Antoine Danchin; Frank Kunst
Journal:  Nat Biotechnol       Date:  2003-10-05       Impact factor: 54.908

10.  Evaluation of normalization methods for microarray data.

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  14 in total

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Journal:  J Ind Microbiol Biotechnol       Date:  2013-10-15       Impact factor: 3.346

2.  Proteomic Investigation of Photorhabdus Bacteria for Nematode-Host Specificity.

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Journal:  Indian J Microbiol       Date:  2016-05-28       Impact factor: 2.461

3.  Competition and Co-existence of Two Photorhabdus Symbionts with a Nematode Host.

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4.  Transcriptional analysis of a Photorhabdus sp. variant reveals transcriptional control of phenotypic variation and multifactorial pathogenicity in insects.

Authors:  A Lanois; S Pages; S Bourot; A-S Canoy; A Givaudan; S Gaudriault
Journal:  Appl Environ Microbiol       Date:  2010-12-03       Impact factor: 4.792

5.  First Report of the Isolation of the Symbiotic Bacterium Photorhabdus luminescens subsp. laumondii Associated with Heterorhabditis safricana from South Africa.

Authors:  J Geldenhuys; A P Malan; L M T Dicks
Journal:  Curr Microbiol       Date:  2016-08-27       Impact factor: 2.188

Review 6.  Nematode-bacterium symbioses--cooperation and conflict revealed in the "omics" age.

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7.  Units of plasticity in bacterial genomes: new insight from the comparative genomics of two bacteria interacting with invertebrates, Photorhabdus and Xenorhabdus.

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Review 8.  Detection of AI-2 receptors in genomes of Enterobacteriaceae suggests a role of type-2 quorum sensing in closed ecosystems.

Authors:  Fabio Rezzonico; Theo H M Smits; Brion Duffy
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9.  Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens.

Authors:  Paul Wilkinson; Nicholas R Waterfield; Lisa Crossman; Craig Corton; Maria Sanchez-Contreras; Isabella Vlisidou; Andrew Barron; Alexandra Bignell; Louise Clark; Douglas Ormond; Matthew Mayho; Nathalie Bason; Frances Smith; Mark Simmonds; Carol Churcher; David Harris; Nicholas R Thompson; Michael Quail; Julian Parkhill; Richard H Ffrench-Constant
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10.  Plastic architecture of bacterial genome revealed by comparative genomics of Photorhabdus variants.

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