Literature DB >> 16385043

Characterization of dissimilatory Fe(III) versus NO3- reduction in the hyperthermophilic archaeon Pyrobaculum aerophilum.

Lawrence F Feinberg1, James F Holden.   

Abstract

The hyperthermophilic archaeon Pyrobaculum aerophilum used 20 mM Fe(III) citrate, 100 mM poorly crystalline Fe(III) oxide, and 10 mM KNO3 as terminal electron acceptors. The two forms of iron were reduced at different rates but with equal growth yields. The insoluble iron was reduced when segregated spatially by dialysis tubing, indicating that direct contact with the iron was not necessary for growth. When partitioned, there was no detectable Fe(III) or Fe(II) outside of the tubing after growth, suggesting that an electron shuttle, not a chelator, may be used as an extracellular mediator of iron reduction. The addition of 25 and 50% (vol vol(-1)) cell-free spent insoluble iron media to fresh media led to growth without a lag phase. Liquid chromatography analysis of spent media showed that cultures grown in iron, especially insoluble iron, produced soluble extracellular compounds that were absent or less abundant in spent nitrate medium. NADH-dependent ferric reductase activity increased approximately 100-fold, while nitrate reductase activity decreased 10-fold in whole-cell extracts from iron-grown cells relative to those from nitrate-grown cells, suggesting that dissimilatory iron reduction was regulated. A novel 2,6-anthrahydroquinone disulfonate oxidase activity was more than 580-fold higher in iron-grown cells than in nitrate-grown cells. The activity was primarily (>95%) associated with the membrane cellular fraction, but its physiological function is unknown. Nitrate-grown cultures produced two membrane-bound, c-type cytochromes that are predicted to be monoheme and part of nitrite reductase and a bc1 complex using genome analyses. Only one cytochrome was present in cells grown on Fe(III) citrate whose relative abundance was unchanged.

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Year:  2006        PMID: 16385043      PMCID: PMC1347303          DOI: 10.1128/JB.188.2.525-531.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

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2.  MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.

Authors:  Jessica E Butler; Franz Kaufmann; Maddalena V Coppi; Cinthia Núñez; Derek R Lovley
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

3.  Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for Biofilms.

Authors:  Douglas P Lies; Maria E Hernandez; Andreas Kappler; Randall E Mielke; Jeffrey A Gralnick; Dianne K Newman
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

4.  Lack of production of electron-shuttling compounds or solubilization of Fe(III) during reduction of insoluble Fe(III) oxide by Geobacter metallireducens.

Authors:  K P Nevin; D R Lovley
Journal:  Appl Environ Microbiol       Date:  2000-05       Impact factor: 4.792

5.  Cloning and sequence of cymA, a gene encoding a tetraheme cytochrome c required for reduction of iron(III), fumarate, and nitrate by Shewanella putrefaciens MR-1.

Authors:  C R Myers; J M Myers
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

6.  Purification and characterization of the MQH2:NO oxidoreductase from the hyperthermophilic archaeon Pyrobaculum aerophilum.

Authors:  Simon de Vries; Marc J F Strampraad; Shen Lu; Pierre Moënne-Loccoz; Imke Schröder
Journal:  J Biol Chem       Date:  2003-06-10       Impact factor: 5.157

7.  OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.

Authors:  Ching Leang; M V Coppi; D R Lovley
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

8.  Characterization of the Shewanella oneidensis MR-1 decaheme cytochrome MtrA: expression in Escherichia coli confers the ability to reduce soluble Fe(III) chelates.

Authors:  Katy E Pitts; Paul S Dobbin; Francisca Reyes-Ramirez; Andrew J Thomson; David J Richardson; Harriet E Seward
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9.  Direct correlation between rates of anaerobic respiration and levels of mRNA for key respiratory genes in Geobacter sulfurreducens.

Authors:  Kuk-Jeong Chin; Abraham Esteve-Núñez; Ching Leang; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

10.  Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor.

Authors:  Kazem Kashefi; Jason M Tor; Dawn E Holmes; Catherine V Gaw Van Praagh; Anna-Louise Reysenbach; Derek R Lovley
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

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  11 in total

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Authors:  Jessica A Smith; Muktak Aklujkar; Carla Risso; Ching Leang; Ludovic Giloteaux; Dawn E Holmes
Journal:  Appl Environ Microbiol       Date:  2015-02-06       Impact factor: 4.792

2.  Evidence for direct electron transfer by a gram-positive bacterium isolated from a microbial fuel cell.

Authors:  K C Wrighton; J C Thrash; R A Melnyk; J P Bigi; K G Byrne-Bailey; J P Remis; D Schichnes; M Auer; C J Chang; J D Coates
Journal:  Appl Environ Microbiol       Date:  2011-09-09       Impact factor: 4.792

Review 3.  A review of the mechanisms of mineral-based metabolism in early Earth analog rock-hosted hydrothermal ecosystems.

Authors:  Maximiliano J Amenabar; Eric S Boyd
Journal:  World J Microbiol Biotechnol       Date:  2019-01-28       Impact factor: 3.312

4.  Citric acid cycle in the hyperthermophilic archaeon Pyrobaculum islandicum grown autotrophically, heterotrophically, and mixotrophically with acetate.

Authors:  Yajing Hu; James F Holden
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

5.  The Geoglobus acetivorans genome: Fe(III) reduction, acetate utilization, autotrophic growth, and degradation of aromatic compounds in a hyperthermophilic archaeon.

Authors:  Andrey V Mardanov; Galina B Slododkina; Alexander I Slobodkin; Alexey V Beletsky; Sergey N Gavrilov; Ilya V Kublanov; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin; Nikolai V Ravin
Journal:  Appl Environ Microbiol       Date:  2014-11-21       Impact factor: 4.792

6.  Transcriptional map of respiratory versatility in the hyperthermophilic crenarchaeon Pyrobaculum aerophilum.

Authors:  Aaron E Cozen; Matthew T Weirauch; Katherine S Pollard; David L Bernick; Joshua M Stuart; Todd M Lowe
Journal:  J Bacteriol       Date:  2008-12-01       Impact factor: 3.490

7.  Characterization of malate dehydrogenase from the hyperthermophilic archaeon Pyrobaculum islandicum.

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Journal:  Extremophiles       Date:  2007-05-09       Impact factor: 2.395

8.  Constraints on anaerobic respiration in the hyperthermophilic Archaea Pyrobaculum islandicum and Pyrobaculum aerophilum.

Authors:  Lawrence F Feinberg; R Srikanth; Richard W Vachet; James F Holden
Journal:  Appl Environ Microbiol       Date:  2007-11-26       Impact factor: 4.792

Review 9.  The Proposed Molecular Mechanisms Used by Archaea for Fe(III) Reduction and Fe(II) Oxidation.

Authors:  Yiran Dong; Yawei Shan; Kemin Xia; Liang Shi
Journal:  Front Microbiol       Date:  2021-07-01       Impact factor: 5.640

10.  Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis.

Authors:  Arnulf Kletzin; Thomas Heimerl; Jennifer Flechsler; Laura van Niftrik; Reinhard Rachel; Andreas Klingl
Journal:  Front Microbiol       Date:  2015-05-12       Impact factor: 5.640

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