Literature DB >> 16385023

Multiple sclerosis medical image analysis and information management.

Lifeng Liu1, Dominik Meier, Mariann Polgar-Turcsanyi, Pawel Karkocha, Rohit Bakshi, Charles R G Guttmann.   

Abstract

Magnetic resonance imaging (MRI) has become a central tool for patient management, as well as research, in multiple sclerosis (MS). Measurements of disease burden and activity derived from MRI through quantitative image analysis techniques are increasingly being used. There are many complexities and challenges in building computerized processing pipelines to ensure efficiency, reproducibility, and quality control for MRI scans from MS patients. Such paradigms require advanced image processing and analysis technologies, as well as integrated database management systems to ensure the most utility for clinical and research purposes. This article reviews pipelines available for quantitative clinical MRI research in MS, including image segmentation, registration, time-series analysis, performance validation, visualization techniques, and advanced medical imaging software packages. To address the complex demands of the sequential processes, the authors developed a workflow management system that uses a centralized database and distributed computing system for image processing and analysis. The implementation of their system includes a web-form-based Oracle database application for information management and event dispatching, and multiple modules for image processing and analysis. The seamless integration of processing pipelines with the database makes it more efficient for users to navigate complex, multistep analysis protocols, reduces the user's learning curve, reduces the time needed for combining and activating different computing modules, and allows for close monitoring for quality-control purposes. The authors' system can be extended to general applications in clinical trials and to routine processing for image-based clinical research.

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Mesh:

Year:  2005        PMID: 16385023     DOI: 10.1177/1051228405282864

Source DB:  PubMed          Journal:  J Neuroimaging        ISSN: 1051-2284            Impact factor:   2.486


  9 in total

Review 1.  Magnetic resonance spectroscopy in the monitoring of multiple sclerosis.

Authors:  Ponnada A Narayana
Journal:  J Neuroimaging       Date:  2005       Impact factor: 2.486

2.  Is it time to re-prioritize neuroimaging databases and digital repositories?

Authors:  John Darrell Van Horn; Arthur W Toga
Journal:  Neuroimage       Date:  2009-04-14       Impact factor: 6.556

3.  A Java-based fMRI processing pipeline evaluation system for assessment of univariate general linear model and multivariate canonical variate analysis-based pipelines.

Authors:  Jing Zhang; Lichen Liang; Jon R Anderson; Lael Gatewood; David A Rottenberg; Stephen C Strother
Journal:  Neuroinformatics       Date:  2008-05-28

4.  Provenance in neuroimaging.

Authors:  Allan J Mackenzie-Graham; John D Van Horn; Roger P Woods; Karen L Crawford; Arthur W Toga
Journal:  Neuroimage       Date:  2008-04-25       Impact factor: 6.556

5.  HLA B*44: protective effects in MS susceptibility and MRI outcome measures.

Authors:  B C Healy; M Liguori; D Tran; T Chitnis; B Glanz; C Wolfish; S Gauthier; G Buckle; M Houtchens; L Stazzone; S Khoury; R Hartzmann; M Fernandez-Vina; D A Hafler; H L Weiner; C R G Guttmann; P L De Jager
Journal:  Neurology       Date:  2010-08-17       Impact factor: 9.910

6.  Neuroimaging study designs, computational analyses and data provenance using the LONI pipeline.

Authors:  Ivo Dinov; Kamen Lozev; Petros Petrosyan; Zhizhong Liu; Paul Eggert; Jonathan Pierce; Alen Zamanyan; Shruthi Chakrapani; John Van Horn; D Stott Parker; Rico Magsipoc; Kelvin Leung; Boris Gutman; Roger Woods; Arthur Toga
Journal:  PLoS One       Date:  2010-09-28       Impact factor: 3.240

7.  A putative Alzheimer's disease risk allele in PCK1 influences brain atrophy in multiple sclerosis.

Authors:  Zongqi Xia; Lori B Chibnik; Bonnie I Glanz; Maria Liguori; Joshua M Shulman; Dong Tran; Samia J Khoury; Tanuja Chitnis; Todd Holyoak; Howard L Weiner; Charles R G Guttmann; Philip L De Jager
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

8.  Handling changes in MRI acquisition parameters in modeling whole brain lesion volume and atrophy data in multiple sclerosis subjects: Comparison of linear mixed-effect models.

Authors:  Alicia S Chua; Svetlana Egorova; Mark C Anderson; Mariann Polgar-Turcsanyi; Tanuja Chitnis; Howard L Weiner; Charles R G Guttmann; Rohit Bakshi; Brian C Healy
Journal:  Neuroimage Clin       Date:  2015-07-02       Impact factor: 4.881

9.  Efficient, Distributed and Interactive Neuroimaging Data Analysis Using the LONI Pipeline.

Authors:  Ivo D Dinov; John D Van Horn; Kamen M Lozev; Rico Magsipoc; Petros Petrosyan; Zhizhong Liu; Allan Mackenzie-Graham; Paul Eggert; Douglas S Parker; Arthur W Toga
Journal:  Front Neuroinform       Date:  2009-07-20       Impact factor: 4.081

  9 in total

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