Literature DB >> 16384426

Physics of size selectivity.

Roland Roth1, Dirk Gillespie.   

Abstract

We demonstrate that two mechanisms used by biological ion channels to select particles by size are driven by entropy. With uncharged particles in an infinite cylinder, we show that a channel that attracts particles is small-particle selective and that a channel that repels water from the wall is large-particle selective. Comparing against the extensive density-functional theory calculations of our model, we find that the main physics can be understood with surprisingly simple bulk models that neglect the confining geometry of the channel completely.

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Year:  2005        PMID: 16384426     DOI: 10.1103/PhysRevLett.95.247801

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  7 in total

1.  Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids.

Authors:  Bob Eisenberg; Yunkyong Hyon; Chun Liu
Journal:  J Chem Phys       Date:  2010-09-14       Impact factor: 3.488

2.  Steric selectivity in Na channels arising from protein polarization and mobile side chains.

Authors:  Dezso Boda; Wolfgang Nonner; Mónika Valiskó; Douglas Henderson; Bob Eisenberg; Dirk Gillespie
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

3.  Bubbles, gating, and anesthetics in ion channels.

Authors:  Roland Roth; Dirk Gillespie; Wolfgang Nonner; Robert E Eisenberg
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

Review 4.  Interacting ions in biophysics: real is not ideal.

Authors:  Bob Eisenberg
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

5.  Ca2+ selectivity of a chemically modified OmpF with reduced pore volume.

Authors:  Henk Miedema; Maarten Vrouenraets; Jenny Wierenga; Dirk Gillespie; Bob Eisenberg; Wim Meijberg; Wolfgang Nonner
Journal:  Biophys J       Date:  2006-09-22       Impact factor: 4.033

6.  Computational methods and theory for ion channel research.

Authors:  C Guardiani; F Cecconi; L Chiodo; G Cottone; P Malgaretti; L Maragliano; M L Barabash; G Camisasca; M Ceccarelli; B Corry; R Roth; A Giacomello; B Roux
Journal:  Adv Phys X       Date:  2022

7.  Non-monotonic crossover from single-file to regular diffusion in micro-channels.

Authors:  U Siems; C Kreuter; A Erbe; N Schwierz; S Sengupta; P Leiderer; P Nielaba
Journal:  Sci Rep       Date:  2012-12-21       Impact factor: 4.379

  7 in total

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