Literature DB >> 16383485

Scaling in critical random Boolean networks.

Viktor Kaufman1, Tamara Mihaljev, Barbara Drossel.   

Abstract

We derive mostly analytically the scaling behavior of the number of nonfrozen and relevant nodes in critical Kauffman networks (with two inputs per node) in the thermodynamic limit. By defining and analyzing a stochastic process that determines the frozen core we can prove that the mean number of nonfrozen nodes scales with the network size N as N(2/3), with only N(1/3) nonfrozen nodes having two nonfrozen inputs. We also show the probability distributions for the numbers of these nodes. Using a different stochastic process, we determine the scaling behavior of the number of relevant nodes. Their mean number increases for large N as N(1/3), and only a finite number of relevant nodes have two relevant inputs. It follows that all relevant components apart from a finite number are simple loops and that the mean number and length of attractors increases faster than any power law with network size.

Year:  2005        PMID: 16383485     DOI: 10.1103/PhysRevE.72.046124

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  3 in total

1.  Logical Reduction of Biological Networks to Their Most Determinative Components.

Authors:  Mihaela T Matache; Valentin Matache
Journal:  Bull Math Biol       Date:  2016-07-14       Impact factor: 1.758

2.  Detecting small attractors of large Boolean networks by function-reduction-based strategy.

Authors:  Qiben Zheng; Liangzhong Shen; Xuequn Shang; Wenbin Liu
Journal:  IET Syst Biol       Date:  2016-04       Impact factor: 1.615

3.  Identification of Biologically Essential Nodes via Determinative Power in Logical Models of Cellular Processes.

Authors:  Trevor Pentzien; Bhanwar L Puniya; Tomáš Helikar; Mihaela T Matache
Journal:  Front Physiol       Date:  2018-08-31       Impact factor: 4.566

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.