Literature DB >> 16382365

Phylogenetic analysis of Bambusa (Poaceae: Bambusoideae) based on internal transcribed spacer sequences of nuclear ribosomal DNA.

Ye Sun1, Nianhe Xia, Rushun Lin.   

Abstract

Phylogenetic analyses of Bambusa species were performed using internal transcribed spacer sequences of nuclear ribosomal DNA. The 21 species sampled included members of Bambusa (sensu stricto), Dendrocalamopsis, Dendrocalamus, Guadua, Leleba, and Lingnania. Arundinaria gigantea was used as an outgroup. Using the maximum parsimony method with PAUP*, gaps were treated as missing states or new states. Parsimonious analysis revealed that Dendrocalamus latiflorus was closely related to the members of Dendrocalamopsis. Dendrocalamus membranaceus was a sister species to Dendrocalamus strictus. Three Dendrocalamus species were closely related to and nested in a polyphyletic Bambusa. Bambusa subaequalis was a sister species to B. multiplex, B. emeiensis to B. chungii, B. contracta to B. hainanensis, and B. flexuosa was a sister species to B. sinospinosa, B. tuldoides, B. surrecta, B. intermedia, and B. valida group, which raised doubts about the monophyly of the subgenera Bambusa (sensu stricto), Dendrocalamopsis, Leleba, and Lingnania under the genus Bambusa.

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Year:  2005        PMID: 16382365     DOI: 10.1007/s10528-005-9117-4

Source DB:  PubMed          Journal:  Biochem Genet        ISSN: 0006-2928            Impact factor:   1.890


  5 in total

1.  Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s.

Authors:  Sarawood Sungkaew; Chris M A Stapleton; Nicolas Salamin; Trevor R Hodkinson
Journal:  J Plant Res       Date:  2008-11-19       Impact factor: 2.629

2.  Molecular phylogeny of 21 tropical bamboo species reconstructed by integrating non-coding internal transcribed spacer (ITS1 and 2) sequences and their consensus secondary structure.

Authors:  Jayadri Sekhar Ghosh; Samik Bhattacharya; Amita Pal
Journal:  Genetica       Date:  2017-04-24       Impact factor: 1.082

3.  The evolution and utility of ribosomal ITS sequences in Bambusinae and related species: divergence, pseudogenes, and implications for phylogeny.

Authors:  Hui-Xing Song; Su-Ping Gao; Ming-Yan Jiang; Guang-Li Liu; Xiao-Fang Yu; Qi-Bing Chen
Journal:  J Genet       Date:  2012-08       Impact factor: 1.166

4.  Exploring phylogenetic relationships within the subgenera of Bambusa based on DNA barcodes and morphological characteristics.

Authors:  An Ke Wang; Qi Fan Lu; Zhen Xian Zhu; Sheng Hui Liu; Hao Zhong; Zi Zhang Xiao; Yue Guo Zou; Li Jian Gu; Xu Hua Du; Han Jiang Cai; Yu Fang Bi
Journal:  Sci Rep       Date:  2022-05-16       Impact factor: 4.996

5.  High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae).

Authors:  Yun-Jie Zhang; Peng-Fei Ma; De-Zhu Li
Journal:  PLoS One       Date:  2011-05-31       Impact factor: 3.240

  5 in total

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