| Literature DB >> 16381079 |
Hisashi Okumura1, Yuko Okamoto.
Abstract
We present new generalized-ensemble molecular dynamics simulation algorithms, which we refer to as the multibaric-multithermal molecular dynamics. We describe three algorithms based on (1) the Nosé thermostat and the Andersen barostat, (2) the Nosé-Poincaré thermostat and the Andersen barostat, and (3) the Gaussian thermostat and the Andersen barostat. The multibaric-multithermal simulations perform random walks widely both in the potential-energy space and in the volume space. Therefore, one can calculate isobaric-isothermal ensemble averages in wide ranges of temperature and pressure from only one simulation run. We test the effectiveness of the multibaric-multithermal algorithm by applying it to a Lennard-Jones 12-6 potential system.Year: 2006 PMID: 16381079 DOI: 10.1002/jcc.20351
Source DB: PubMed Journal: J Comput Chem ISSN: 0192-8651 Impact factor: 3.376