Literature DB >> 16377025

Inferential literacy for experimental high-throughput biology.

Mathieu Miron1, Robert Nadon.   

Abstract

Many biologists believe that data analysis expertise lags behind the capacity for producing high-throughput data. One view within the bioinformatics community is that biological scientists need to develop algorithmic skills to meet the demands of the new technologies. In this article, we argue that the broader concept of inferential literacy, which includes understanding of data characteristics, experimental design and statistical analysis, in addition to computation, more adequately encompasses what is needed for efficient progress in high-throughput biology.

Mesh:

Year:  2005        PMID: 16377025     DOI: 10.1016/j.tig.2005.12.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  9 in total

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Authors:  Ernest S Kawasaki
Journal:  J Biomol Tech       Date:  2006-07

2.  Repeatability of published microarray gene expression analyses.

Authors:  John P A Ioannidis; David B Allison; Catherine A Ball; Issa Coulibaly; Xiangqin Cui; Aedín C Culhane; Mario Falchi; Cesare Furlanello; Laurence Game; Giuseppe Jurman; Jon Mangion; Tapan Mehta; Michael Nitzberg; Grier P Page; Enrico Petretto; Vera van Noort
Journal:  Nat Genet       Date:  2008-01-28       Impact factor: 38.330

3.  MIPHENO: data normalization for high throughput metabolite analysis.

Authors:  Shannon M Bell; Lyle D Burgoon; Robert L Last
Journal:  BMC Bioinformatics       Date:  2012-01-13       Impact factor: 3.169

4.  Cyber-T web server: differential analysis of high-throughput data.

Authors:  Matthew A Kayala; Pierre Baldi
Journal:  Nucleic Acids Res       Date:  2012-05-16       Impact factor: 16.971

Review 5.  Integration and mining of malaria molecular, functional and pharmacological data: how far are we from a chemogenomic knowledge space?

Authors:  Lyn-Marie Birkholtz; Olivier Bastien; Gordon Wells; Delphine Grando; Fourie Joubert; Vinod Kasam; Marc Zimmermann; Philippe Ortet; Nicolas Jacq; Nadia Saïdani; Sylvaine Roy; Martin Hofmann-Apitius; Vincent Breton; Abraham I Louw; Eric Maréchal
Journal:  Malar J       Date:  2006-11-17       Impact factor: 2.979

6.  mRNA expression analysis of the hippocampus in a vervet monkey model of fetal alcohol spectrum disorder.

Authors:  Rob F Gillis; Roberta M Palmour
Journal:  J Neurodev Disord       Date:  2022-03-19       Impact factor: 4.025

7.  EMMA 2--a MAGE-compliant system for the collaborative analysis and integration of microarray data.

Authors:  Michael Dondrup; Stefan P Albaum; Thasso Griebel; Kolja Henckel; Sebastian Jünemann; Tim Kahlke; Christiane K Kleindt; Helge Küster; Burkhard Linke; Dominik Mertens; Virginie Mittard-Runte; Heiko Neuweger; Kai J Runte; Andreas Tauch; Felix Tille; Alfred Pühler; Alexander Goesmann
Journal:  BMC Bioinformatics       Date:  2009-02-06       Impact factor: 3.169

8.  A white-box approach to microarray probe response characterization: the BaFL pipeline.

Authors:  Kevin J Thompson; Hrishikesh Deshmukh; Jeffrey L Solka; Jennifer W Weller
Journal:  BMC Bioinformatics       Date:  2009-12-29       Impact factor: 3.169

9.  Using the information embedded in the testing sample to break the limits caused by the small sample size in microarray-based classification.

Authors:  Manli Zhu; Aleix M Martinez
Journal:  BMC Bioinformatics       Date:  2008-06-14       Impact factor: 3.169

  9 in total

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