Literature DB >> 16374842

Crystal structure of a putative pyridoxine 5'-phosphate oxidase (Rv2607) from Mycobacterium tuberculosis.

Jean-Denis Pédelacq1, Beom-Seop Rho, Chang-Yub Kim, Geoffrey S Waldo, Timothy P Lekin, Brent W Segelke, Bernhard Rupp, Li-Wei Hung, Su-Il Kim, Thomas C Terwilliger.   

Abstract

The three-dimensional structure of Rv2607, a putative pyridoxine 5'-phosphate oxidase (PNPOx) from Mycobacterium tuberculosis, has been determined by X-ray crystallography to 2.5 A resolution. Rv2607 has a core domain similar to known PNPOx structures with a flavin mononucleotide (FMN) cofactor. Electron density for two FMN at the dimer interface is weak despite the bright yellow color of the protein solution and crystal. The shape and size of the putative binding pocket is markedly different from that of members of the PNPOx family, which may indicate some significant changes in the FMN binding mode of this protein relative to members of the family. (c) 2005 Wiley-Liss, Inc.

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Year:  2006        PMID: 16374842     DOI: 10.1002/prot.20824

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  9 in total

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5.  Rv2607 from Mycobacterium tuberculosis is a pyridoxine 5'-phosphate oxidase with unusual substrate specificity.

Authors:  Ellene H Mashalidis; Tathagata Mukherjee; Paweł Sledź; Dijana Matak-Vinković; Helena Boshoff; Chris Abell; Clifton E Barry
Journal:  PLoS One       Date:  2011-11-14       Impact factor: 3.240

6.  Experimental Evidence for a Revision in the Annotation of Putative Pyridoxamine 5'-Phosphate Oxidases P(N/M)P from Fungi.

Authors:  Tatiana Domitrovic; Diana P Raymundo; Tiago Fernandes da Silva; Fernando L Palhano
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7.  Analysis of factors influencing hydration site prediction based on molecular dynamics simulations.

Authors:  Ying Yang; Bingjie Hu; Markus A Lill
Journal:  J Chem Inf Model       Date:  2014-10-07       Impact factor: 4.956

Review 8.  Vitamin B6: a long known compound of surprising complexity.

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9.  Equal opportunity for low-degree network nodes: a PageRank-based method for protein target identification in metabolic graphs.

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  9 in total

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