Literature DB >> 16373612

Atherosclerosis susceptibility loci identified from a strain intercross of apolipoprotein E-deficient mice via a high-density genome scan.

Jonathan D Smith1, Jeffrey M Bhasin, Julie Baglione, Megan Settle, Yaomin Xu, John Barnard.   

Abstract

OBJECTIVE: Apolipoprotein (apo) E-deficient mice are hypercholesterolemic and develop atherosclerosis on low-fat chow diets; however, the genetic background strain has a large effect on atherosclerosis susceptibility. This study aimed to determine the genetic regions associated with strain effects on lesion area. METHODS AND
RESULTS: We performed a strain intercross between atherosclerosis sensitive DBA/2 and atherosclerosis resistant AKR apoE-deficient mice. Aortic root lesion area, total cholesterol, body weights, and complete blood counts were ascertained for 114 male and 95 female F2 progeny. A high-density genome scan was performed using a mouse single nucleotide polymorphism chip yielding 1967 informative polymorphic markers. Quantitative trait locus (QTL) statistical analyses were performed. Novel loci associated with lesion or log lesion area were identified for the female and male F2 cohorts. The atherosclerosis QTLs in female mice reside on chromosomes 15, 5, 3, and 13, and in male mice on chromosomes 17, 18, and 2. QTL were also identified for body weight, total cholesterol, and blood count parameters.
CONCLUSIONS: Loci were identified for atherosclerosis susceptibility in a strain intercross study. The identity of the responsible genes at these loci remains to be determined.

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Year:  2005        PMID: 16373612     DOI: 10.1161/01.ATV.0000201044.33220.5c

Source DB:  PubMed          Journal:  Arterioscler Thromb Vasc Biol        ISSN: 1079-5642            Impact factor:   8.311


  36 in total

1.  High-resolution association mapping of atherosclerosis loci in mice.

Authors:  Brian J Bennett; Luz Orozco; Emrah Kostem; Ayca Erbilgin; Marchien Dallinga; Isaac Neuhaus; Bo Guan; Xuping Wang; Eleazar Eskin; Aldons J Lusis
Journal:  Arterioscler Thromb Vasc Biol       Date:  2012-06-21       Impact factor: 8.311

2.  Quantitative trait loci for peripheral blood cell counts: a study in baboons.

Authors:  Angéline Bertin; Michael C Mahaney; Laura A Cox; Jeffrey Rogers; John L VandeBerg; Carlo Brugnara; Orah S Platt
Journal:  Mamm Genome       Date:  2007-06-08       Impact factor: 2.957

3.  Supervised principal component analysis for gene set enrichment of microarray data with continuous or survival outcomes.

Authors:  Xi Chen; Lily Wang; Jonathan D Smith; Bing Zhang
Journal:  Bioinformatics       Date:  2008-08-27       Impact factor: 6.937

Review 4.  A systems biology approach to understanding atherosclerosis.

Authors:  Stephen A Ramsey; Elizabeth S Gold; Alan Aderem
Journal:  EMBO Mol Med       Date:  2010-03       Impact factor: 12.137

5.  Genetic analysis of atherosclerosis identifies a major susceptibility locus in the major histocompatibility complex of mice.

Authors:  Andrew T Grainger; Michael B Jones; Jing Li; Mei-Hua Chen; Ani Manichaikul; Weibin Shi
Journal:  Atherosclerosis       Date:  2016-10-06       Impact factor: 5.162

Review 6.  Genetic and genomic insights into the molecular basis of atherosclerosis.

Authors:  Yaoyu Chen; Jarod Rollins; Beverly Paigen; Xiaosong Wang
Journal:  Cell Metab       Date:  2007-09       Impact factor: 27.287

7.  Genetic loci that control the size of laser-induced choroidal neovascularization.

Authors:  Kei Nakai; Michael S Rogers; Takashi Baba; Taisaku Funakoshi; Amy E Birsner; Dema S Luyindula; Robert J D'Amato
Journal:  FASEB J       Date:  2009-02-23       Impact factor: 5.191

8.  Transcriptional profiling of chromosome 17 quantitative trait Loci for carbohydrate and total calorie intake in a mouse congenic strain reveals candidate genes and pathways.

Authors:  K Ganesh Kumar; Brenda K Smith Richards
Journal:  J Nutrigenet Nutrigenomics       Date:  2008-01-17

9.  Aging in inbred strains of mice: study design and interim report on median lifespans and circulating IGF1 levels.

Authors:  Rong Yuan; Shirng-Wern Tsaih; Stefka B Petkova; Caralina Marin de Evsikova; Shuqin Xing; Michael A Marion; Molly A Bogue; Kevin D Mills; Luanne L Peters; Carol J Bult; Clifford J Rosen; John P Sundberg; David E Harrison; Gary A Churchill; Beverly Paigen
Journal:  Aging Cell       Date:  2009-04-09       Impact factor: 9.304

10.  Quantitative trait locus analysis for hemostasis and thrombosis.

Authors:  Qila Sa; Erika Hart; Annie E Hill; Joseph H Nadeau; Jane L Hoover-Plow
Journal:  Mamm Genome       Date:  2008-09-12       Impact factor: 2.957

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