Literature DB >> 16365313

Structure of the mid-region of tropomyosin: bending and binding sites for actin.

Jerry H Brown1, Zhaocai Zhou, Ludmilla Reshetnikova, Howard Robinson, Rama D Yammani, Larry S Tobacman, Carolyn Cohen.   

Abstract

Tropomyosin is a two-chain alpha-helical coiled coil whose periodic interactions with the F-actin helix are critical for thin filament stabilization and the regulation of muscle contraction. Here we deduce the mechanical and chemical basis of these interactions from the 2.3-A-resolution crystal structure of the middle three of tropomyosin's seven periods. Geometrically specific bends of the coiled coil, produced by clusters of core alanines, and variable bends about gaps in the core, produced by isolated alanines, occur along the molecule. The crystal packing is notable in signifying that the functionally important fifth period includes an especially favorable protein-binding site, comprising an unusual apolar patch on the surface together with surrounding charged residues. Based on these and other results, we have constructed a specific model of the thin filament, with the N-terminal halves of each period (i.e., the so-called "alpha zones") of tropomyosin axially aligned with subdomain 3 of each monomer in F-actin.

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Year:  2005        PMID: 16365313      PMCID: PMC1323185          DOI: 10.1073/pnas.0509269102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  54 in total

Review 1.  Structural basis for bending tropomyosin around actin in muscle thin filaments.

Authors:  M Stewart
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

2.  Deciphering the design of the tropomyosin molecule.

Authors:  J H Brown; K H Kim; G Jun; N J Greenfield; R Dominguez; N Volkmann; S E Hitchcock-DeGregori; C Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

3.  The crystal structure of the C-terminal fragment of striated-muscle alpha-tropomyosin reveals a key troponin T recognition site.

Authors:  Yu Li; Suet Mui; Jerry H Brown; James Strand; Ludmilla Reshetnikova; Larry S Tobacman; Carolyn Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

4.  The troponin tail domain promotes a conformational state of the thin filament that suppresses myosin activity.

Authors:  Larry S Tobacman; Mahta Nihli; Carol Butters; Mark Heller; Victoria Hatch; Roger Craig; William Lehman; Earl Homsher
Journal:  J Biol Chem       Date:  2002-05-14       Impact factor: 5.157

5.  Tropomyosin and actin isoforms modulate the localization of tropomyosin strands on actin filaments.

Authors:  W Lehman; V Hatch; V Korman; M Rosol; L Thomas; R Maytum; M A Geeves; J E Van Eyk; L S Tobacman; R Craig
Journal:  J Mol Biol       Date:  2000-09-22       Impact factor: 5.469

6.  Analysis of alpha-helical coiled coils with the program TWISTER reveals a structural mechanism for stutter compensation.

Authors:  Sergei V Strelkov; Peter Burkhard
Journal:  J Struct Biol       Date:  2002 Jan-Feb       Impact factor: 2.867

7.  Removing an interhelical salt bridge abolishes coiled-coil formation in a de novo designed peptide.

Authors:  Markus Meier; Ariel Lustig; Ueli Aebi; Peter Burkhard
Journal:  J Struct Biol       Date:  2002 Jan-Feb       Impact factor: 2.867

8.  Improving coiled-coil stability by optimizing ionic interactions.

Authors:  Peter Burkhard; Sergei Ivaninskii; Ariel Lustig
Journal:  J Mol Biol       Date:  2002-05-03       Impact factor: 5.469

9.  Single particle analysis of relaxed and activated muscle thin filaments.

Authors:  Alnoor Pirani; Chen Xu; Victoria Hatch; Roger Craig; Larry S Tobacman; William Lehman
Journal:  J Mol Biol       Date:  2005-01-11       Impact factor: 5.469

10.  The crystal structure of uncomplexed actin in the ADP state.

Authors:  L R Otterbein; P Graceffa; R Dominguez
Journal:  Science       Date:  2001-07-27       Impact factor: 47.728

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  72 in total

1.  How sequence directs bending in tropomyosin and other two-stranded alpha-helical coiled coils.

Authors:  Jerry H Brown
Journal:  Protein Sci       Date:  2010-07       Impact factor: 6.725

2.  Two-crystal structures of tropomyosin C-terminal fragment 176-273: exposure of the hydrophobic core to the solvent destabilizes the tropomyosin molecule.

Authors:  Shiho Minakata; Kayo Maeda; Naoko Oda; Katsuzo Wakabayashi; Yasushi Nitanai; Yuichiro Maéda
Journal:  Biophys J       Date:  2008-03-13       Impact factor: 4.033

Review 3.  Gestalt-binding of tropomyosin to actin filaments.

Authors:  Kenneth C Holmes; William Lehman
Journal:  J Muscle Res Cell Motil       Date:  2008-12-31       Impact factor: 2.698

Review 4.  Periodicities designed in the tropomyosin sequence and structure define its functions.

Authors:  Bipasha Barua
Journal:  Bioarchitecture       Date:  2013-07-08

5.  Probing the flexibility of tropomyosin and its binding to filamentous actin using molecular dynamics simulations.

Authors:  Wenjun Zheng; Bipasha Barua; Sarah E Hitchcock-DeGregori
Journal:  Biophys J       Date:  2013-10-15       Impact factor: 4.033

6.  Evolutionarily conserved surface residues constitute actin binding sites of tropomyosin.

Authors:  Bipasha Barua; Melissa C Pamula; Sarah E Hitchcock-DeGregori
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-03       Impact factor: 11.205

7.  Tropomyosin position on F-actin revealed by EM reconstruction and computational chemistry.

Authors:  Xiaochuan Edward Li; Larry S Tobacman; Ji Young Mun; Roger Craig; Stefan Fischer; William Lehman
Journal:  Biophys J       Date:  2011-02-16       Impact factor: 4.033

8.  Tropomyosin dynamics during cardiac muscle contraction as governed by a multi-well energy landscape.

Authors:  Yasser Aboelkassem; Natalia Trayanova
Journal:  Prog Biophys Mol Biol       Date:  2018-08-23       Impact factor: 3.667

9.  Electrostatic interaction map reveals a new binding position for tropomyosin on F-actin.

Authors:  Michael J Rynkiewicz; Veronika Schott; Marek Orzechowski; William Lehman; Stefan Fischer
Journal:  J Muscle Res Cell Motil       Date:  2015-08-19       Impact factor: 2.698

10.  Modulation of elasticity in functionally distinct domains of the tropomyosin coiled-coil.

Authors:  Sirish Kaushik Lakkaraju; Wonmuk Hwang
Journal:  Cell Mol Bioeng       Date:  2009-03-01       Impact factor: 2.321

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