Literature DB >> 16363833

MXAN analysis of the XANES energy region of a mononuclear copper complex: applications to bioinorganic systems.

Ritimukta Sarangi1, Maurizio Benfatto, Kuniko Hayakawa, Luigi Bubacco, Edward I Solomon, Keith O Hodgson, Britt Hedman.   

Abstract

The near edge XAS spectra of the mononuclear copper complex [Cu(TMPA)(OH(2))](ClO(4))(2) (1) have been simulated using the multiple scattering edge simulation package MXAN (or Minuit XANes). These simulations, which employ the muffin-tin (MT) approximation, have been compared to simulations generated using the finite-difference method (FDM) to evaluate the effect of MT corrections. The sensitivity of the MXAN method was tested using structural models that included several different variations on the bond angles and bond distances for the first-shell atoms of 1. The sensitivity to small structural changes was also evaluated by comparing MXAN simulations of 1 and of structurally modified [Cu(TMPA)(L)](n)(+) complexes [where L = -O-(F(8)TPP)Fe(III), -F, -OPO(2)(O-p-nitrophenyl)Zn(II)(TMPA), and -NCMe] to the experimental data. The accuracy of the bond distances obtained from the MXAN simulations was then examined by comparison to the metrics of the crystal structures. The results show that MXAN can successfully extract geometric information from the edge structure of an XAS spectrum. The systematic application of MXAN to 1 indicates that this approach is sensitive to small structural changes in the molecule that are manifested in the XAS edge spectrum. These results represent the first step toward the application of this methodology to bioinorganic and biological systems.

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Year:  2005        PMID: 16363833     DOI: 10.1021/ic050703n

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  6 in total

1.  Structure and dynamics of metalloproteins in live cells.

Authors:  Jeremy D Cook; James E Penner-Hahn; Timothy L Stemmler
Journal:  Methods Cell Biol       Date:  2008       Impact factor: 1.441

2.  Structural features that govern enzymatic activity in carbonic anhydrase from a low-temperature adapted fish, Chionodraco hamatus.

Authors:  Stefano Marino; Kuniko Hayakawa; Keisuke Hatada; Maurizio Benfatto; Antonia Rizzello; Michele Maffia; Luigi Bubacco
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

3.  X-ray absorption near-edge spectroscopy in bioinorganic chemistry: Application to M-O2 systems.

Authors:  Ritimukta Sarangi
Journal:  Coord Chem Rev       Date:  2012-07-03       Impact factor: 22.315

4.  The x-ray absorption spectroscopy model of solvation about sulfur in aqueous L-cysteine.

Authors:  Ritimukta Sarangi; Patrick Frank; Maurizio Benfatto; Silvia Morante; Velia Minicozzi; Britt Hedman; Keith O Hodgson
Journal:  J Chem Phys       Date:  2012-11-28       Impact factor: 3.488

5.  Geometric structure determination of N694C lipoxygenase: a comparative near-edge X-ray absorption spectroscopy and extended X-ray absorption fine structure study.

Authors:  Ritimukta Sarangi; Rosalie K Hocking; Michael L Neidig; Maurizio Benfatto; Theodore R Holman; Edward I Solomon; Keith O Hodgson; Britt Hedman
Journal:  Inorg Chem       Date:  2008-12-15       Impact factor: 5.165

6.  Quantitative X-ray Absorption and Emission Spectroscopies: Electronic Structure Elucidation of Cu2S and CuS.

Authors:  Prashant Kumar; Rajamani Nagarajan; Ritimukta Sarangi
Journal:  J Mater Chem C Mater       Date:  2013-04-07       Impact factor: 7.393

  6 in total

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