Literature DB >> 16357215

The Drosophila microRNA iab-4 causes a dominant homeotic transformation of halteres to wings.

Matthew Ronshaugen1, Frédéric Biemar, Jessica Piel, Mike Levine, Eric C Lai.   

Abstract

The Drosophila Bithorax Complex encodes three well-characterized homeodomain proteins that direct segment identity, as well as several noncoding RNAs of unknown function. Here, we analyze the iab-4 locus, which produces the microRNAs iab-4-5p and iab-4-3p. iab-4 is analogous to miR-196 in vertebrate Hox clusters. Previous studies demonstrate that miR-196 interacts with the Hoxb8 3' untranslated region. Evidence is presented that miR-iab-4-5p directly inhibits Ubx activity in vivo. Ectopic expression of mir-iab-4-5p attenuates endogenous Ubx protein accumulation and induces a classical homeotic mutant phenotype: the transformation of halteres into wings. These findings provide the first evidence for a noncoding homeotic gene and raise the possibility that other such genes occur within the Bithorax complex. We also discuss the regulation of mir-iab-4 expression during development.

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Year:  2005        PMID: 16357215      PMCID: PMC1315399          DOI: 10.1101/gad.1372505

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  40 in total

1.  The small RNA profile during Drosophila melanogaster development.

Authors:  Alexei A Aravin; Mariana Lagos-Quintana; Abdullah Yalcin; Mihaela Zavolan; Debora Marks; Ben Snyder; Terry Gaasterland; Jutta Meyer; Thomas Tuschl
Journal:  Dev Cell       Date:  2003-08       Impact factor: 12.270

2.  Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.

Authors:  Benjamin P Lewis; Christopher B Burge; David P Bartel
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

3.  Phylogenetic shadowing and computational identification of human microRNA genes.

Authors:  Eugene Berezikov; Victor Guryev; José van de Belt; Erno Wienholds; Ronald H A Plasterk; Edwin Cuppen
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

4.  Pervasive regulation of Drosophila Notch target genes by GY-box-, Brd-box-, and K-box-class microRNAs.

Authors:  Eric C Lai; Bergin Tam; Gerald M Rubin
Journal:  Genes Dev       Date:  2005-04-15       Impact factor: 11.361

5.  Progression of the cell cycle through mitosis leads to abortion of nascent transcripts.

Authors:  A W Shermoen; P H O'Farrell
Journal:  Cell       Date:  1991-10-18       Impact factor: 41.582

6.  Genetic organization of Drosophila bithorax complex.

Authors:  E Sánchez-Herrero; I Vernós; R Marco; G Morata
Journal:  Nature       Date:  1985 Jan 10-18       Impact factor: 49.962

7.  Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals.

Authors:  Xiaohui Xie; Jun Lu; E J Kulbokas; Todd R Golub; Vamsi Mootha; Kerstin Lindblad-Toh; Eric S Lander; Manolis Kellis
Journal:  Nature       Date:  2005-02-27       Impact factor: 49.962

8.  abdA expression in Drosophila embryos.

Authors:  F Karch; W Bender; B Weiffenbach
Journal:  Genes Dev       Date:  1990-09       Impact factor: 11.361

9.  Ultrabithorax and the control of cell morphology in Drosophila halteres.

Authors:  F Roch; M Akam
Journal:  Development       Date:  2000-01       Impact factor: 6.868

10.  microRNA target predictions across seven Drosophila species and comparison to mammalian targets.

Authors:  Dominic Grün; Yi-Lu Wang; David Langenberger; Kristin C Gunsalus; Nikolaus Rajewsky
Journal:  PLoS Comput Biol       Date:  2005-06-24       Impact factor: 4.475

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  71 in total

1.  A genome-wide transgenic resource for conditional expression of Drosophila microRNAs.

Authors:  Fernando Bejarano; Diane Bortolamiol-Becet; Qi Dai; Kailiang Sun; Abil Saj; Yu-Ting Chou; David R Raleigh; Kevin Kim; Jian-Quan Ni; Hong Duan; Jr-Shiuan Yang; Tudor A Fulga; David Van Vactor; Norbert Perrimon; Eric C Lai
Journal:  Development       Date:  2012-06-28       Impact factor: 6.868

2.  High affinity, dsRNA binding by disconnected interacting protein 1.

Authors:  Daniel J Catanese; Kathleen S Matthews
Journal:  Biochem Biophys Res Commun       Date:  2010-07-17       Impact factor: 3.575

Review 3.  Hox miRNA regulation within the Drosophila Bithorax complex: Patterning behavior.

Authors:  Daniel L Garaulet; Eric C Lai
Journal:  Mech Dev       Date:  2015-08-23       Impact factor: 1.882

4.  Comprehensive identification of Drosophila dorsal-ventral patterning genes using a whole-genome tiling array.

Authors:  Frédéric Biemar; David A Nix; Jessica Piel; Brant Peterson; Matthew Ronshaugen; Victor Sementchenko; Ian Bell; J Robert Manak; Michael S Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-14       Impact factor: 11.205

5.  Common functions for diverse small RNAs of land plants.

Authors:  Michael J Axtell; Jo Ann Snyder; David P Bartel
Journal:  Plant Cell       Date:  2007-06-29       Impact factor: 11.277

Review 6.  Evo-devo: variations on ancestral themes.

Authors:  E M De Robertis
Journal:  Cell       Date:  2008-01-25       Impact factor: 41.582

7.  Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci.

Authors:  David M Tyler; Katsutomo Okamura; Wei-Jen Chung; Joshua W Hagen; Eugene Berezikov; Gregory J Hannon; Eric C Lai
Journal:  Genes Dev       Date:  2008-01-01       Impact factor: 11.361

8.  The Drosophila nerfin-1 mRNA requires multiple microRNAs to regulate its spatial and temporal translation dynamics in the developing nervous system.

Authors:  Alexander Kuzin; Mukta Kundu; Thomas Brody; Ward F Odenwald
Journal:  Dev Biol       Date:  2007-07-24       Impact factor: 3.582

9.  Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes.

Authors:  Alexander Stark; Pouya Kheradpour; Leopold Parts; Julius Brennecke; Emily Hodges; Gregory J Hannon; Manolis Kellis
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

10.  Rhythmic expression of microRNA-26a regulates the L-type voltage-gated calcium channel alpha1C subunit in chicken cone photoreceptors.

Authors:  Liheng Shi; Michael L Ko; Gladys Y-P Ko
Journal:  J Biol Chem       Date:  2009-07-16       Impact factor: 5.157

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