Literature DB >> 16348556

Abundance of viruses in marine waters: assessment by epifluorescence and transmission electron microscopy.

S Hara1, K Terauchi, I Koike.   

Abstract

Abundance of bacteria and tiny DNA-associated particles in the upper layer of Japanese coastal and offshore waters was evaluated by epifluorescence microscopy with 0.015-mum-pore-size Nuclepore filters. The number of tiny DNA-associated particles was compared with the abundance of virus particles estimated by transmission electron microscopy. Although a large variation in virus abundance (1.2 x 10 to 35 x 10 ml) was obtained with the transmission electron microscopy method, the ratio of 4',6-diamidino-2-phenylindole-reactive tiny particles to viruses was in a rather narrow range (1.0 to 1.6), indicating that the majority of the tiny DNA-associated particles identified by epifluorescence microscopy were actually virus particles. This result implies the possibility of using epifluorescence microscopy for the evaluation of virus abundance in marine environments.

Entities:  

Year:  1991        PMID: 16348556      PMCID: PMC183648          DOI: 10.1128/aem.57.9.2731-2734.1991

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  7 in total

1.  Simplified method for dissolved DNA determination in aquatic environments.

Authors:  M F Deflaun; J H Paul; D Davis
Journal:  Appl Environ Microbiol       Date:  1986-10       Impact factor: 4.792

2.  Microcultural study of bacterial size changes and microcolony and ultramicrocolony formation by heterotrophic bacteria in seawater.

Authors:  F Torrella; R Y Morita
Journal:  Appl Environ Microbiol       Date:  1981-02       Impact factor: 4.792

3.  Isolation and characterization of ultramicrobacteria from a gulf coast estuary.

Authors:  M T Macdonell; M A Hood
Journal:  Appl Environ Microbiol       Date:  1982-03       Impact factor: 4.792

4.  Viruses as partners in spring bloom microbial trophodynamics.

Authors:  G Bratbak; M Heldal; S Norland; T F Thingstad
Journal:  Appl Environ Microbiol       Date:  1990-05       Impact factor: 4.792

5.  Enumeration and biomass estimation of planktonic bacteria and viruses by transmission electron microscopy.

Authors:  K Y Børsheim; G Bratbak; M Heldal
Journal:  Appl Environ Microbiol       Date:  1990-02       Impact factor: 4.792

6.  High abundance of viruses found in aquatic environments.

Authors:  O Bergh; K Y Børsheim; G Bratbak; M Heldal
Journal:  Nature       Date:  1989-08-10       Impact factor: 49.962

7.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

  7 in total
  43 in total

1.  Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR gold.

Authors:  F Chen; J R Lu; B J Binder; Y C Liu; R E Hodson
Journal:  Appl Environ Microbiol       Date:  2001-02       Impact factor: 4.792

Review 2.  Virioplankton: viruses in aquatic ecosystems.

Authors:  K E Wommack; R R Colwell
Journal:  Microbiol Mol Biol Rev       Date:  2000-03       Impact factor: 11.056

3.  A comparison of methods for counting viruses in aquatic systems.

Authors:  Y Bettarel; T Sime-Ngando; C Amblard; H Laveran
Journal:  Appl Environ Microbiol       Date:  2000-06       Impact factor: 4.792

4.  Simultaneous direct counting of total and specific microbial cells in seawater, using a deep-sea microbe as target.

Authors:  A Maruyama; M Sunamura
Journal:  Appl Environ Microbiol       Date:  2000-05       Impact factor: 4.792

5.  Determination of virus abundance in marine sediments.

Authors:  R Danovaro; A Dell'Anno; A Trucco; M Serresi; S Vanucci
Journal:  Appl Environ Microbiol       Date:  2001-03       Impact factor: 4.792

6.  Elevated abundance of bacteriophage infecting bacteria in soil.

Authors:  Kevin E Ashelford; Martin J Day; John C Fry
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

7.  Phage community dynamics in hot springs.

Authors:  Mya Breitbart; Linda Wegley; Steven Leeds; Tom Schoenfeld; Forest Rohwer
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

8.  Optimization of procedures for counting viruses by flow cytometry.

Authors:  Corina P D Brussaard
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

9.  Movement of viruses between biomes.

Authors:  Emiko Sano; Suzanne Carlson; Linda Wegley; Forest Rohwer
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

10.  Enumerating viruses by using fluorescence and the nature of the nonviral background fraction.

Authors:  Peter C Pollard
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

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