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Literature DB >> 16348376

Distribution of Hydrogenase Genes in Desulfovibrio spp. and Their Use in Identification of Species from the Oil Field Environment.

G Voordouw¹, V Niviere, F G Ferris, P M Fedorak, D W Westlake.

Abstract

The distribution of genes for [Fe], [NiFe], and [NiFeSe] hydrogenases was determined for 22 Desulfovibrio species. The genes for [NiFe] hydrogenase were present in all species, whereas those for the [Fe] and [NiFeSe] hydrogenases had a more limited distribution. Sulfate-reducing bacteria from 16S rRNA groups other than the genus Desulfovibrio (R. Devereux, M. Delaney, F. Widdel, and D. A. Stahl, J. Bacteriol. 171:6689-6695, 1989) did not react with the [NiFe] hydrogenase gene probe, which could be used to identify different Desulfovibrio species in oil field samples following growth on lactate-sulfate medium.

Entities: Chemical

Year: 1990 PMID： 16348376 PMCID： PMC185062 DOI： 10.1128/aem.56.12.3748-3754.1990

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

20 in total

1. Cloning and sequencing of a [NiFe] hydrogenase operon from Desulfovibrio vulgaris Miyazaki F.

Authors: H M Deckers; F R Wilson; G Voordouw
Journal: J Gen Microbiol Date: 1990-10

2. Analysis and comparison of nucleotide sequences encoding the genes for [NiFe] and [NiFeSe] hydrogenases from Desulfovibrio gigas and Desulfovibrio baculatus.

Authors: G Voordouw; N K Menon; J LeGall; E S Choi; H D Peck; A E Przybyla
Journal: J Bacteriol Date: 1989-05 Impact factor: 3.490

3. Natural relationships among sulfate-reducing eubacteria.

Authors: R Devereux; M Delaney; F Widdel; D A Stahl
Journal: J Bacteriol Date: 1989-12 Impact factor: 3.490

Review 4. Physiology, biochemistry, and genetics of the uptake hydrogenase in rhizobia.

Authors: H J Evans; A R Harker; H Papen; S A Russell; F J Hanus; M Zuber
Journal: Annu Rev Microbiol Date: 1987 Impact factor: 15.500

5. Identification of three classes of hydrogenase in the genus, Desulfovibrio.

Authors: B C Prickril; S H He; C Li; N Menon; E S Choi; A E Przybyla; D V DerVartanian; H D Peck; G Fauque; J LeGall
Journal: Biochem Biophys Res Commun Date: 1987-12-16 Impact factor: 3.575

6. Cloning and sequencing of the genes encoding the large and the small subunits of the H2 uptake hydrogenase (hup) of Rhodobacter capsulatus.

Authors: M Leclerc; A Colbeau; B Cauvin; P M Vignais
Journal: Mol Gen Genet Date: 1988-09

7. Nucleotide sequence of the gene encoding the hydrogenase from Desulfovibrio vulgaris (Hildenborough).

Authors: G Voordouw; S Brenner
Journal: Eur J Biochem Date: 1985-05-02

8. The identification, characterization, sequencing and mutagenesis of the genes (hupSL) encoding the small and large subunits of the H2-uptake hydrogenase of Azotobacter chroococcum.

Authors: C M Ford; N Garg; R P Garg; K H Tibelius; M G Yates; D J Arp; L C Seefeldt
Journal: Mol Microbiol Date: 1990-06 Impact factor: 3.501

9. The presence of multiple intrinsic membrane nickel-containing hydrogenases in Desulfovibrio vulgaris (Hildenborough).

Authors: T Lissolo; E S Choi; J LeGall; H D Peck
Journal: Biochem Biophys Res Commun Date: 1986-09-14 Impact factor: 3.575

10. hyd gamma, a gene from Desulfovibrio vulgaris (Hildenborough) encodes a polypeptide homologous to the periplasmic hydrogenase.

Authors: J Stokkermans; W van Dongen; A Kaan; W van den Berg; C Veeger
Journal: FEMS Microbiol Lett Date: 1989-04 Impact factor: 2.742

32 in total

1. Selenium is involved in regulation of periplasmic hydrogenase gene expression in Desulfovibrio vulgaris Hildenborough.

Authors: Filipa M A Valente; Cláudia C Almeida; Isabel Pacheco; João Carita; Lígia M Saraiva; Inês A C Pereira
Journal: J Bacteriol Date: 2006-05 Impact factor: 3.490

2. Quantitative reverse sample genome probing of microbial communities and its application to oil field production waters.

Authors: G Voordouw; Y Shen; C S Harrington; A J Telang; T R Jack; D W Westlake
Journal: Appl Environ Microbiol Date: 1993-12 Impact factor: 4.792

3. Identification of distinct communities of sulfate-reducing bacteria in oil fields by reverse sample genome probing.

Authors: G Voordouw; J K Voordouw; T R Jack; J Foght; P M Fedorak; D W Westlake
Journal: Appl Environ Microbiol Date: 1992-11 Impact factor: 4.792

4. Effect of nitrate injection on the microbial community in an oil field as monitored by reverse sample genome probing.

Authors: A J Telang; S Ebert; J M Foght; D Westlake; G E Jenneman; D Gevertz; G Voordouw
Journal: Appl Environ Microbiol Date: 1997-05 Impact factor: 4.792

5. The genus desulfovibrio: the centennial.

Authors: G Voordouw
Journal: Appl Environ Microbiol Date: 1995-08 Impact factor: 4.792

6. Function of periplasmic hydrogenases in the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough.

Authors: Sean M Caffrey; Hyung-Soo Park; Johanna K Voordouw; Zhili He; Jizhong Zhou; Gerrit Voordouw
Journal: J Bacteriol Date: 2007-06-29 Impact factor: 3.490

7. Gene expression by the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough grown on an iron electrode under cathodic protection conditions.

Authors: Sean M Caffrey; Hyung Soo Park; Jenny Been; Paul Gordon; Christoph W Sensen; Gerrit Voordouw
Journal: Appl Environ Microbiol Date: 2008-02-29 Impact factor: 4.792