Literature DB >> 16347902

Vertical and horizontal variations in the physiological diversity of the aerobic chemoheterotrophic bacterial microflora in deep southeast coastal plain subsurface sediments.

D L Balkwill1, J K Fredrickson, J M Thomas.   

Abstract

Aerobic chemoheterotrophic bacteria were isolated from surface soils and coastal plain subsurface (including deep aquifer) sediments (depths to 265 m) at a study site near Aiken, S.C., by plating on concentrated and dilute media. Morphologically distinct colonies were purified, and their responses to 21 selected physiological tests were determined. These isolates were quite diverse; 626 physiologically distinct types (i.e., types with a unique pattern of responses to the 21 tests) were detected among the 1,112 isolates obtained. Physiologically distinct types were isolated on concentrated and dilute media (only 11% overlap between the groups); isolates from surface soils and subsurface sediments were also quite different (only 3% overlap). The surface soil isolates more readily utilized all but 1 of 12 carbon sources offered, and a significantly larger proportion of them hydrolyzed esculin and gelatin. Only 4% of the subsurface isolates fermented glucose, even though 82% of them could use it aerobically. l-Malate and d-gluconate were utilized by at least 75% of the subsurface isolates, and seven other carbon sources were used by at least 40% of them. Subsurface isolates from different geological formations (depths) and, to a lesser extent, from the same geological formation at different boreholes differed distinctly in their group responses to certain physiological tests. Moreover, sediments from different depths and boreholes contained physiologically distinct types of bacteria. Thus, considerable bacterial diversity was observed in coastal plain subsurface sediments, even within defined geological formations.

Entities:  

Year:  1989        PMID: 16347902      PMCID: PMC184254          DOI: 10.1128/aem.55.5.1058-1065.1989

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  3 in total

1.  Distribution of protozoa in subsurface sediments of a pristine groundwater study site in oklahoma.

Authors:  J L Sinclair; W C Ghiorse
Journal:  Appl Environ Microbiol       Date:  1987-05       Impact factor: 4.792

2.  Characterization of subsurface bacteria associated with two shallow aquifers in oklahoma.

Authors:  D L Balkwill; W C Ghiorse
Journal:  Appl Environ Microbiol       Date:  1985-09       Impact factor: 4.792

Review 3.  Microbial ecology of the terrestrial subsurface.

Authors:  W C Ghiorse; J T Wilson
Journal:  Adv Appl Microbiol       Date:  1988       Impact factor: 5.086

  3 in total
  39 in total

1.  Genetic diversity among Arthrobacter species collected across a heterogeneous series of terrestrial deep-subsurface sediments as determined on the basis of 16S rRNA and recA gene sequences.

Authors:  L G van Waasbergen; D L Balkwill; F H Crocker; B N Bjornstad; R V Miller
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

2.  Novel group I intron in the tRNA(Leu)(UAA) gene of a gamma-proteobacterium isolated from a deep subsurface environment.

Authors:  Alexey A Vepritskiy; Inna A Vitol; Sandra A Nierzwicki-Bauer
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

3.  Boundaries for biofilm formation: humidity and temperature.

Authors:  Terry Ann Else; Curtis R Pantle; Penny S Amy
Journal:  Appl Environ Microbiol       Date:  2003-08       Impact factor: 4.792

4.  Geomicrobiology of high-level nuclear waste-contaminated vadose sediments at the hanford site, washington state.

Authors:  James K Fredrickson; John M Zachara; David L Balkwill; David Kennedy; Shu-mei W Li; Heather M Kostandarithes; Michael J Daly; Margaret F Romine; Fred J Brockman
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

5.  Minerals associated with biofilms occurring on exposed rock in a granitic underground research laboratory.

Authors:  D A Brown; D C Kamineni; J A Sawicki; T J Beveridge
Journal:  Appl Environ Microbiol       Date:  1994-09       Impact factor: 4.792

6.  Diversity within a Colony Morphotype: Implications for Ecological Research.

Authors:  D L Haldeman; P S Amy
Journal:  Appl Environ Microbiol       Date:  1993-03       Impact factor: 4.792

7.  Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the atlantic coastal plain.

Authors:  J K Fredrickson; D L Balkwill; J M Zachara; S M Li; F J Brockman; M A Simmons
Journal:  Appl Environ Microbiol       Date:  1991-02       Impact factor: 4.792

8.  Biochemical fingerprinting of water coliform bacteria, a new method for measuring phenotypic diversity and for comparing different bacterial populations.

Authors:  I Kühn; G Allestam; T A Stenström; R Möllby
Journal:  Appl Environ Microbiol       Date:  1991-11       Impact factor: 4.792

9.  Antibiotic resistance in bacteria isolated from the deep terrestrial subsurface.

Authors:  Mindy G Brown; David L Balkwill
Journal:  Microb Ecol       Date:  2008-08-02       Impact factor: 4.552

10.  Culture-independent metagenomic approach to characterize the surface and subsurface soil bacterial community in the Brahmaputra valley, Assam, North-East India, an Indo-Burma mega-biodiversity hotspot.

Authors:  P N Bhattacharyya; B Tanti; P Barman; D K Jha
Journal:  World J Microbiol Biotechnol       Date:  2013-08-30       Impact factor: 3.312

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