Literature DB >> 16346032

Sampling design and enumeration statistics for bacteria extracted from marine sediments.

P A Montagna1.   

Abstract

The spatial and temporal distributions of marine bacteria were studied at both a muddy and a sandy subtidal site in North Inlet, S.C. The sampling design was hierarchical, since subsampling (by a dilution series) of the sediments was necessary to count bacterial cells using acridine orange epifluoresence microscopy. The cell count data fit a log-normal distribution. The abundance of bacteria was 10 g (dry weight) of mud and 10 g (dry weight) of sand. Variance component analyses demonstrated that variation due to the subsampling procedures was always statistically significant. Thus the common practice of counting 20 fields from one filter preparation is inadequate for estimating the true bacterial population variance in marine sediments. It is recommended that replication of the subsampling level be performed. Standardization of data (by dry weight of sediment) decreased sampling variance at the mud site but not at the sand site, implying that bacteria are more homogeneously distributed in sand than in mud.

Entities:  

Year:  1982        PMID: 16346032      PMCID: PMC244241          DOI: 10.1128/aem.43.6.1366-1372.1982

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  3 in total

1.  Bacterial density in water determined by poisson or negative binomial distributions.

Authors:  A H El-Shaarawi; S R Esterby; B J Dutka
Journal:  Appl Environ Microbiol       Date:  1981-01       Impact factor: 4.792

2.  Comparison of two direct-count techniques for enumerating aquatic bacteria.

Authors:  W B Bowden
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

3.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

  3 in total
  19 in total

1.  Determination of abundance and biovolume of bacteria in sediments by dual staining with 4',6-diamidino-2-phenylindole and acridine orange: relationship to dispersion treatment and sediment characteristics.

Authors:  T Kuwae; Y Hosokawa
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

2.  Improved method of enumeration of attached bacteria for study of fluctuation in the abundance of attached and free-living bacteria in response to diel variation in seawater turbidity.

Authors:  W B Yoon; R A Rosson
Journal:  Appl Environ Microbiol       Date:  1990-03       Impact factor: 4.792

3.  Solutions to problems in enumerating sediment bacteria by direct counts.

Authors:  M Schallenberg; J Kalff; J B Rasmussen
Journal:  Appl Environ Microbiol       Date:  1989-05       Impact factor: 4.792

4.  Microbial activity at the sediment-water interface in halifax harbor, Canada.

Authors:  J A Novitsky
Journal:  Appl Environ Microbiol       Date:  1983-06       Impact factor: 4.792

5.  Bacterial productivity and microbial biomass in tropical mangrove sediments.

Authors:  D M Alongi
Journal:  Microb Ecol       Date:  1988-01       Impact factor: 4.552

6.  Dynamics of microbial biomass and activity in five habitats of the Okefenokee Swamp ecosystem.

Authors:  M A Moran; A E Maccubbin; R Benner; R E Hodson
Journal:  Microb Ecol       Date:  1987-11       Impact factor: 4.552

7.  A study of the occurrence and distribution of bdellovibrios in estuarine sediment over an annual cycle.

Authors:  H N Williams
Journal:  Microb Ecol       Date:  1988-01       Impact factor: 4.552

8.  Changes in community structure of sediment bacteria along the Florida coastal everglades marsh-mangrove-seagrass salinity gradient.

Authors:  Makoto Ikenaga; Rafael Guevara; Amanda L Dean; Cristina Pisani; Joseph N Boyer
Journal:  Microb Ecol       Date:  2009-08-26       Impact factor: 4.552

9.  Efficacy of phospholipid analysis in determining microbial biomass in sediments.

Authors:  R H Findlay; G M King; L Watling
Journal:  Appl Environ Microbiol       Date:  1989-11       Impact factor: 4.792

10.  Spatial distribution of biochemical parameters indicating biomass and community composition of microbial assemblies in estuarine mud flat sediments.

Authors:  T W Federle; M A Hullar; R J Livingston; D A Meeter; D C White
Journal:  Appl Environ Microbiol       Date:  1983-01       Impact factor: 4.792

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