Literature DB >> 16341609

Replicated linkage for eye color on 15q using comparative ratings of sibling pairs.

Danielle Posthuma1, Peter M Visscher, Gonneke Willemsen, Gu Zhu, Nicholas G Martin, P Eline Slagboom, Eco J C de Geus, Dorret I Boomsma.   

Abstract

: The aim of the study was to perform a genetic linkage analysis for eye color, for comparative data. Similarity in eye color of mono- and dizygotic twins was rated by the twins' mother, their father and/or the twins themselves. For 4,748 twin pairs the similarity in eye color was available on a three point scale ("not at all alike"-"somewhat alike"-"completely alike"), absolute eye color on individuals was not assessed. The probability that twins were alike for eye color was calculated as a weighted average of the different responses of all respondents on several different time points. The mean probability of being alike for eye color was 0.98 for MZ twins (2,167 pairs), whereas the mean probability for DZ twins was 0.46 (2,537 pairs), suggesting very high heritability for eye color. For 294 DZ twin pairs genome-wide marker data were available. The probability of being alike for eye color was regressed on the average amount of IBD sharing. We found a peak LOD-score of 2.9 at chromosome 15q, overlapping with the region recently implicated for absolute ratings of eye color in Australian twins [Zhu, G., Evans, D. M., Duffy, D. L., Montgomery, G. W., Medland, S. E., Gillespie, N. A., Ewen, K. R., Jewell, M., Liew, Y. W., Hayward, N. K., Sturm, R. A., Trent, J. M., and Martin, N. G. (2004). Twin Res. 7:197-210] and containing the OCA2 gene, which is the major candidate gene for eye color [Sturm, R. A. Teasdale, R. D, and Box, N. F. (2001). Gene 277:49-62]. Our results demonstrate that comparative measures on relatives can be used in genetic linkage analysis.

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Year:  2005        PMID: 16341609     DOI: 10.1007/s10519-005-9007-x

Source DB:  PubMed          Journal:  Behav Genet        ISSN: 0001-8244            Impact factor:   2.805


  7 in total

1.  A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation.

Authors:  David L Duffy; Grant W Montgomery; Wei Chen; Zhen Zhen Zhao; Lien Le; Michael R James; Nicholas K Hayward; Nicholas G Martin; Richard A Sturm
Journal:  Am J Hum Genet       Date:  2006-12-20       Impact factor: 11.025

2.  Skin pigmentation and genetic variants in an admixed Brazilian population of primarily European ancestry.

Authors:  Jeppe D Andersen; Olivia S Meyer; Filipa Simão; Juliana Jannuzzi; Elizeu Carvalho; Mikkel M Andersen; Vania Pereira; Claus Børsting; Niels Morling; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2020-05-09       Impact factor: 2.686

3.  Blue eye color in humans may be caused by a perfectly associated founder mutation in a regulatory element located within the HERC2 gene inhibiting OCA2 expression.

Authors:  Hans Eiberg; Jesper Troelsen; Mette Nielsen; Annemette Mikkelsen; Jonas Mengel-From; Klaus W Kjaer; Lars Hansen
Journal:  Hum Genet       Date:  2008-01-03       Impact factor: 4.132

4.  Multilocus OCA2 genotypes specify human iris colors.

Authors:  Tony Frudakis; Timothy Terravainen; Matthew Thomas
Journal:  Hum Genet       Date:  2007-07-07       Impact factor: 4.132

5.  Three genome-wide association studies and a linkage analysis identify HERC2 as a human iris color gene.

Authors:  Manfred Kayser; Fan Liu; A Cecile J W Janssens; Fernando Rivadeneira; Oscar Lao; Kate van Duijn; Mark Vermeulen; Pascal Arp; Mila M Jhamai; Wilfred F J van Ijcken; Johan T den Dunnen; Simon Heath; Diana Zelenika; Dominiek D G Despriet; Caroline C W Klaver; Johannes R Vingerling; Paulus T V M de Jong; Albert Hofman; Yurii S Aulchenko; Andre G Uitterlinden; Ben A Oostra; Cornelia M van Duijn
Journal:  Am J Hum Genet       Date:  2008-01-25       Impact factor: 11.025

6.  A single SNP in an evolutionary conserved region within intron 86 of the HERC2 gene determines human blue-brown eye color.

Authors:  Richard A Sturm; David L Duffy; Zhen Zhen Zhao; Fabio P N Leite; Mitchell S Stark; Nicholas K Hayward; Nicholas G Martin; Grant W Montgomery
Journal:  Am J Hum Genet       Date:  2008-01-24       Impact factor: 11.025

7.  Global skin colour prediction from DNA.

Authors:  Susan Walsh; Lakshmi Chaitanya; Krystal Breslin; Charanya Muralidharan; Agnieszka Bronikowska; Ewelina Pospiech; Julia Koller; Leda Kovatsi; Andreas Wollstein; Wojciech Branicki; Fan Liu; Manfred Kayser
Journal:  Hum Genet       Date:  2017-05-12       Impact factor: 4.132

  7 in total

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