Literature DB >> 16340304

Expressed sequence tags analysis of Blattella germanica.

Hyang Suk Chung1, Tai Hyun Yu, Bong Jin Kim, Sun Mi Kim, Joo Yeong Kim, Hak Sun Yu, Hae Jin Jeong, Mee Sun Ock.   

Abstract

Four hundred and sixty five randomly selected clones from a cDNA library of Blattella germanica were partially sequenced and searched using BLAST as a means of analyzing the transcribed sequences of its genome. A total of 363 expressed sequence tags (ESTs) were generated from 465 clones after editing and trimming the vector and ambiguous sequences. About 42% (154/363) of these clones showed significant homology with other data base registered genes. These new B. germanica genes constituted a broad range of transcripts distributed among ribosomal proteins, energy metabolism, allergens, proteases, protease inhibitors, enzymes, translation, cell signaling pathways, and proteins of unknown function. Eighty clones were not well-matched by database searches, and these represent new B. germanica-specific ESTs. Some genes which drew our attention are discussed. The information obtained increases our understanding of the B. germanica genome.

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Year:  2005        PMID: 16340304      PMCID: PMC2712019          DOI: 10.3347/kjp.2005.43.4.149

Source DB:  PubMed          Journal:  Korean J Parasitol        ISSN: 0023-4001            Impact factor:   1.341


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