Literature DB >> 16338405

Electron cryotomography of the E. coli pyruvate and 2-oxoglutarate dehydrogenase complexes.

Gavin E Murphy1, Grant J Jensen.   

Abstract

The E. coli pyruvate and 2-oxoglutarate dehydrogenases are two closely related, large complexes that exemplify a growing number of multiprotein "machines" whose domains have been studied extensively and modeled in atomic detail, but whose quaternary structures have remained unclear for lack of an effective imaging technology. Here, electron cryotomography was used to show that the E1 and E3 subunits of these complexes are flexibly tethered approximately 11 nm away from the E2 core. This result demonstrates unambiguously that electron cryotomography can reveal the relative positions of features as small as 80 kDa in individual complexes, elucidating quaternary structure and conformational flexibility.

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Year:  2005        PMID: 16338405     DOI: 10.1016/j.str.2005.08.016

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  13 in total

Review 1.  Electron cryotomography.

Authors:  Elitza I Tocheva; Zhuo Li; Grant J Jensen
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-05       Impact factor: 10.005

2.  The E2 domain of OdhA of Corynebacterium glutamicum has succinyltransferase activity dependent on lipoyl residues of the acetyltransferase AceF.

Authors:  Melanie Hoffelder; Katharina Raasch; Jan van Ooyen; Lothar Eggeling
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

3.  A multipronged approach unravels unprecedented protein-protein interactions in the human 2-oxoglutarate dehydrogenase multienzyme complex.

Authors:  Jieyu Zhou; Luying Yang; Oliver Ozohanics; Xu Zhang; Junjie Wang; Attila Ambrus; Palaniappa Arjunan; Roman Brukh; Natalia S Nemeria; William Furey; Frank Jordan
Journal:  J Biol Chem       Date:  2018-10-15       Impact factor: 5.157

4.  Structure-function analyses of the G729R 2-oxoadipate dehydrogenase genetic variant associated with a disorder of l-lysine metabolism.

Authors:  Xu Zhang; Natalia S Nemeria; João Leandro; Sander Houten; Michael Lazarus; Gary Gerfen; Oliver Ozohanics; Attila Ambrus; Balint Nagy; Roman Brukh; Frank Jordan
Journal:  J Biol Chem       Date:  2020-04-17       Impact factor: 5.157

5.  Nanogold as a specific marker for electron cryotomography.

Authors:  Yongning He; Grant J Jensen; Pamela J Bjorkman
Journal:  Microsc Microanal       Date:  2009-06       Impact factor: 4.127

Review 6.  Toward an Understanding of the Structural and Mechanistic Aspects of Protein-Protein Interactions in 2-Oxoacid Dehydrogenase Complexes.

Authors:  Natalia S Nemeria; Xu Zhang; Joao Leandro; Jieyu Zhou; Luying Yang; Sander M Houten; Frank Jordan
Journal:  Life (Basel)       Date:  2021-04-29

7.  Multilevel interaction of the DnaK/DnaJ(HSP70/HSP40) stress-responsive chaperone machine with the central metabolism.

Authors:  Fréderic Anglès; Marie-Pierre Castanié-Cornet; Nawel Slama; Mickael Dinclaux; Anne-Marie Cirinesi; Jean-Charles Portais; Fabien Létisse; Pierre Genevaux
Journal:  Sci Rep       Date:  2017-01-27       Impact factor: 4.379

8.  Large-scale analysis of post-translational modifications in E. coli under glucose-limiting conditions.

Authors:  Colin W Brown; Viswanadham Sridhara; Daniel R Boutz; Maria D Person; Edward M Marcotte; Jeffrey E Barrick; Claus O Wilke
Journal:  BMC Genomics       Date:  2017-04-17       Impact factor: 3.969

9.  Fully automated, sequential tilt-series acquisition with Leginon.

Authors:  Christian Suloway; Jian Shi; Anchi Cheng; James Pulokas; Bridget Carragher; Clinton S Potter; Shawn Q Zheng; David A Agard; Grant J Jensen
Journal:  J Struct Biol       Date:  2009-04-08       Impact factor: 2.867

10.  Flux balance analysis of cyanobacterial metabolism: the metabolic network of Synechocystis sp. PCC 6803.

Authors:  Henning Knoop; Marianne Gründel; Yvonne Zilliges; Robert Lehmann; Sabrina Hoffmann; Wolfgang Lockau; Ralf Steuer
Journal:  PLoS Comput Biol       Date:  2013-06-27       Impact factor: 4.475

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