Literature DB >> 16337657

The formulation of the control of an expression pattern in a gene network by propositional calculus.

Hideki Nakayama1, Hiroto Tanaka, Toshimitsu Ushio.   

Abstract

In this study we model a gene network as a continuous-time switching network. In this model, each gene has a binary state which indicates if the gene expresses or not. We propose a method to control a sequence of expression patterns in the gene network model by adding another continuous-time switching network. By using propositional calculus, we will show that the control problem can be formulated as a mixed-integer linear programming problem with linear constraints.

Mesh:

Year:  2005        PMID: 16337657     DOI: 10.1016/j.jtbi.2005.10.014

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  1 in total

1.  Polynomial-time algorithm for controllability test of a class of boolean biological networks.

Authors:  Koichi Kobayashi; Jun-Ichi Imura; Kunihiko Hiraishi
Journal:  EURASIP J Bioinform Syst Biol       Date:  2010-08-25
  1 in total

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