Literature DB >> 16336121

6S RNA - an ancient regulator of bacterial RNA polymerase rediscovered.

Dagmar K Willkomm1, Roland K Hartmann.   

Abstract

The bacterial riboregulator 6S RNA was one of the first non-coding RNAs to be discovered in the late 1960s, but its cellular role remained enigmatic until the year 2000. 6S RNA, only recognized to be ubiquitous among bacteria in 2005, binds to RNA polymerase in a sigma factor-dependent manner to repress transcription from a subgroup of promoters. The common feature of a double-stranded rod with a central bulge has led to the proposal that 6S RNA may mimic an open promoter complex.

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Year:  2005        PMID: 16336121     DOI: 10.1515/BC.2005.144

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  20 in total

1.  A pRNA-induced structural rearrangement triggers 6S-1 RNA release from RNA polymerase in Bacillus subtilis.

Authors:  Benedikt M Beckmann; Philipp G Hoch; Manja Marz; Dagmar K Willkomm; Margarita Salas; Roland K Hartmann
Journal:  EMBO J       Date:  2012-02-14       Impact factor: 11.598

2.  Identification of a large noncoding RNA in extremophilic eubacteria.

Authors:  Elena Puerta-Fernandez; Jeffrey E Barrick; Adam Roth; Ronald R Breaker
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

3.  Structure of an A-form RNA duplex obtained by degradation of 6S RNA in a crystallization droplet.

Authors:  Jiro Kondo; Anne Catherine Dock-Bregeon; Dagmar K Willkomm; Roland K Hartmann; Eric Westhof
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-24

4.  Global regulation of transcription by a small RNA: a quantitative view.

Authors:  Mor Nitzan; Karen M Wassarman; Ofer Biham; Hanah Margalit
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

Review 5.  Regulation of transcription by 6S RNAs: insights from the Escherichia coli and Bacillus subtilis model systems.

Authors:  Benedikt Steuten; Philipp G Hoch; Katrin Damm; Sabine Schneider; Karen Köhler; Rolf Wagner; Roland K Hartmann
Journal:  RNA Biol       Date:  2014-04-23       Impact factor: 4.652

6.  Insights from the architecture of the bacterial transcription apparatus.

Authors:  Lakshminarayan M Iyer; L Aravind
Journal:  J Struct Biol       Date:  2011-12-24       Impact factor: 2.867

7.  6S RNA in Rhodobacter sphaeroides: 6S RNA and pRNA transcript levels peak in late exponential phase and gene deletion causes a high salt stress phenotype.

Authors:  Daria Elkina; Lennart Weber; Marcus Lechner; Olga Burenina; Andrea Weisert; Elena Kubareva; Roland K Hartmann; Gabriele Klug
Journal:  RNA Biol       Date:  2017-09-13       Impact factor: 4.652

Review 8.  Regulation by small RNAs in bacteria: expanding frontiers.

Authors:  Gisela Storz; Jörg Vogel; Karen M Wassarman
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

9.  6S RNA binding to Esigma(70) requires a positively charged surface of sigma(70) region 4.2.

Authors:  Andrew D Klocko; Karen M Wassarman
Journal:  Mol Microbiol       Date:  2009-06-16       Impact factor: 3.501

10.  Maturation of 6S regulatory RNA to a highly elongated structure.

Authors:  Vasiliki E Fadouloglou; Hong-Tin V Lin; Giancarlo Tria; Helena Hernández; Carol V Robinson; Dmitri I Svergun; Ben F Luisi
Journal:  FEBS J       Date:  2015-10-13       Impact factor: 5.542

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