Literature DB >> 16333128

PCR protocol for specific identification of Candida nivariensis, a recently described pathogenic yeast.

Julia Alcoba-Flórez1, María del Pilar Arévalo, F Javier González-Paredes, Josep Cano, Josep Guarro, Eduardo Pérez-Roth, Sebastián Méndez-Alvarez.   

Abstract

Candida nivariensis is a recently described pathogenic yeast closely related to Candida glabrata. We developed a specific set of oligonucleotide primers based on the internal transcribed spacer regions of the rRNA gene for the rapid identification of C. nivariensis. PCR with these primers amplified a 206-bp amplicon from C. nivariensis.

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Year:  2005        PMID： 16333128      PMCID： PMC1317211          DOI： 10.1128/JCM.43.12.6194-6196.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  10 in total

1.  THE THREE DS OF PCR-BASED GENOMIC ANALYSIS OF PHYTOBACTERIA: Diversity, Detection, and Disease Diagnosis.

Authors:  FJ Louws; JLW Rademaker; FJ de Bruijn
Journal:  Annu Rev Phytopathol       Date:  1999       Impact factor: 13.078

2.  Identification of medically important yeasts using PCR-based detection of DNA sequence polymorphisms in the internal transcribed spacer 2 region of the rRNA genes.

Authors:  Y C Chen; J D Eisner; M M Kattar; S L Rassoulian-Barrett; K LaFe; S L Yarfitz; A P Limaye; B T Cookson
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

3.  Phenotypic and molecular characterization of Candida nivariensis sp. nov., a possible new opportunistic fungus.

Authors:  Julia Alcoba-Flórez; Sebastián Méndez-Alvarez; Josep Cano; Josep Guarro; Eduardo Pérez-Roth; María del Pilar Arévalo
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

4.  Rapid identification of Candida species in blood cultures by a clinically useful PCR method.

Authors:  J H Shin; F S Nolte; C J Morrison
Journal:  J Clin Microbiol       Date:  1997-06       Impact factor: 5.948

5.  Detection and identification of Candida species associated with Candida vaginitis by real-time PCR and pyrosequencing.

Authors:  Jason P Trama; Eli Mordechai; Martin E Adelson
Journal:  Mol Cell Probes       Date:  2005-01-20       Impact factor: 2.365

Review 6.  Fungal infections in patients undergoing blood and marrow transplantation.

Authors:  K A Marr; R A Bowden
Journal:  Transpl Infect Dis       Date:  1999-12       Impact factor: 2.228

7.  Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5' end of the large-subunit (26S) ribosomal DNA gene.

Authors:  C P Kurtzman; C J Robnett
Journal:  J Clin Microbiol       Date:  1997-05       Impact factor: 5.948

8.  Comparison of different methods of isolation of DNA of commonly encountered Candida species and its quantitation by using a real-time PCR-based assay.

Authors:  Younes Maaroufi; Naïma Ahariz; Mireille Husson; Françoise Crokaert
Journal:  J Clin Microbiol       Date:  2004-07       Impact factor: 5.948

Review 9.  Genome comparison in yeast systematics: delimitation of species within the genera Schwanniomyces, Saccharomyces, Debaryomyces, and Pichia.

Authors:  C W Price; G B Fuson; H J Phaff
Journal:  Microbiol Rev       Date:  1978-03

10.  Rapid identification of up to three Candida species in a single reaction tube by a 5' exonuclease assay using fluorescent DNA probes.

Authors:  J H Shin; F S Nolte; B P Holloway; C J Morrison
Journal:  J Clin Microbiol       Date:  1999-01       Impact factor: 5.948
  10 in total
  14 in total

Review 1.  Candida nivariensis as a New Emergent Agent of Vulvovaginal Candidiasis: Description of Cases and Review of Published Studies.

Authors:  Pilar Aznar-Marin; Fátima Galan-Sanchez; Pilar Marin-Casanova; Pedro García-Martos; Manuel Rodríguez-Iglesias
Journal:  Mycopathologia       Date:  2015-12-26       Impact factor: 2.574

2.  Association of ocular toxoplasmosis with type I Toxoplasma gondii strains: direct genotyping from peripheral blood samples.

Authors:  Karolina Switaj; Adam Master; Piotr Karol Borkowski; Magdalena Skrzypczak; Jacek Wojciechowicz; Piotr Zaborowski
Journal:  J Clin Microbiol       Date:  2006-09-27       Impact factor: 5.948

3.  Catheter-related fungemia due to fluconazole-resistant Candida nivariensis.

Authors:  Shin-ichi Fujita; Yasuko Senda; Tikako Okusi; Yumi Ota; Hideaki Takada; Kazunori Yamada; Mitsuhiro Kawano
Journal:  J Clin Microbiol       Date:  2007-07-25       Impact factor: 5.948

4.  Candida nivariensis isolated from an Indonesian human immunodeficiency virus-infected patient suffering from oropharyngeal candidiasis.

Authors:  Retno Wahyuningsih; Ivo N SahBandar; Bart Theelen; Ferry Hagen; Gé Poot; Jacques F Meis; Anna Rozalyani; Ridhawati Sjam; Djoko Widodo; Samsuridjal Djauzi; Teun Boekhout
Journal:  J Clin Microbiol       Date:  2007-11-14       Impact factor: 5.948

5.  Occurrence and characterization of Candida nivariensis from a culture collection of Candida glabrata clinical isolates in Malaysia.

Authors:  Sun Tee Tay; Azadeh Lotfalikhani; Negar Shafiei Sabet; Sasheela Ponnampalavanar; Sofiah Sulaiman; Shiang Ling Na; Kee Peng Ng
Journal:  Mycopathologia       Date:  2014-07-15       Impact factor: 2.574

6.  Rapid discrimination between Candida glabrata, Candida nivariensis, and Candida bracarensis by use of a singleplex PCR.

Authors:  A Enache-Angoulvant; J Guitard; F Grenouillet; T Martin; P Durrens; C Fairhead; C Hennequin
Journal:  J Clin Microbiol       Date:  2011-07-13       Impact factor: 5.948

7.  Prevalence of Candida nivariensis and Candida bracarensis in vulvovaginal Candidiasis.

Authors:  Jianling Li; Yingying Shan; Shangrong Fan; Xiaoping Liu
Journal:  Mycopathologia       Date:  2014-08-15       Impact factor: 2.574

8.  Differentiation of Candida glabrata, C. nivariensis and C. bracarensis based on fragment length polymorphism of ITS1 and ITS2 and restriction fragment length polymorphism of ITS and D1/D2 regions in rDNA.

Authors:  H Mirhendi; B Bruun; H C Schønheyder; J J Christensen; K Fuursted; B Gahrn-Hansen; H K Johansen; L Nielsen; J D Knudsen; M C Arendrup
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2011-05-24       Impact factor: 3.267

9.  Fenticonazole activity measured by the methods of the European Committee on Antimicrobial Susceptibility Testing and CLSI against 260 Candida vulvovaginitis isolates from two European regions and annotations on the prevalent genotypes.

Authors:  Stavroula Antonopoulou; Michel Aoun; Evangelos C Alexopoulos; Stavroula Baka; Emanuel Logothetis; Theodoros Kalambokas; Andreas Zannos; Konstantine Papadias; Odysseas Grigoriou; Evangelia Kouskouni; Aristea Velegraki
Journal:  Antimicrob Agents Chemother       Date:  2009-02-17       Impact factor: 5.191

10.  Candida nivariensis, an emerging pathogenic fungus with multidrug resistance to antifungal agents.

Authors:  Andrew M Borman; Rebecca Petch; Christopher J Linton; Michael D Palmer; Paul D Bridge; Elizabeth M Johnson
Journal:  J Clin Microbiol       Date:  2008-01-16       Impact factor: 5.948
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