Literature DB >> 16332041

Spectroscopic and theoretical evidence for oxazolone ring formation in collision-induced dissociation of peptides.

Nick C Polfer1, Jos Oomens, Sándor Suhai, Béla Paizs.   

Abstract

Infrared spectroscopy of the b4+ fragment of Leu-enkephalin demonstrates that the oxazolone ring is formed during collision-induced dissociation of protonated peptides, whereas the linear acylium structure is not observed. Three distinct oxazolone structures are identified, based on the highly conformer-diagnostic C=O stretching mode of the oxazolone ring, clearly showing that proton transfer from the oxazolone ring to the N-terminus takes place. Note that the presence of a cyclic peptide b4+ isomer cannot be excluded.

Entities:  

Year:  2005        PMID: 16332041     DOI: 10.1021/ja056553x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  57 in total

1.  Separation and identification of structural isomers by quadrupole collision-induced dissociation-hydrogen/deuterium exchange-infrared multiphoton dissociation (QCID-HDX-IRMPD).

Authors:  Ashley C Gucinski; Arpád Somogyi; Julia Chamot-Rooke; Vicki H Wysocki
Journal:  J Am Soc Mass Spectrom       Date:  2010-04-02       Impact factor: 3.109

2.  Rearrangement pathways of the a (4) ion of protonated YGGFL characterized by IR spectroscopy and modeling.

Authors:  Béla Paizs; Benjamin J Bythell; Philippe Maître
Journal:  J Am Soc Mass Spectrom       Date:  2012-01-24       Impact factor: 3.109

3.  Conformation-specific spectroscopy of peptide fragment ions in a low-temperature ion trap.

Authors:  Tobias N Wassermann; Oleg V Boyarkin; Béla Paizs; Thomas R Rizzo
Journal:  J Am Soc Mass Spectrom       Date:  2012-03-30       Impact factor: 3.109

4.  Diagnostic NH and OH vibrations for oxazolone and diketopiperazine structures: b2 from protonated triglycine.

Authors:  Da Wang; Kerim Gulyuz; Corey N Stedwell; Nick C Polfer
Journal:  J Am Soc Mass Spectrom       Date:  2011-05-13       Impact factor: 3.109

5.  Effect of the His residue on the cyclization of b ions.

Authors:  Benjamin J Bythell; Michaela Knapp-Mohammady; Béla Paizs; Alex G Harrison
Journal:  J Am Soc Mass Spectrom       Date:  2010-05-13       Impact factor: 3.109

6.  Towards understanding the tandem mass spectra of protonated oligopeptides. 2: The proline effect in collision-induced dissociation of protonated Ala-Ala-Xxx-Pro-Ala (Xxx = Ala, Ser, Leu, Val, Phe, and Trp).

Authors:  Christian Bleiholder; Sándor Suhai; Alex G Harrison; Béla Paizs
Journal:  J Am Soc Mass Spectrom       Date:  2011-04-12       Impact factor: 3.109

7.  Diagnosing the protonation site of b2 peptide fragment ions using IRMPD in the X-H (X = O, N, and C) stretching region.

Authors:  Rajeev K Sinha; Undine Erlekam; Benjamin J Bythell; Béla Paizs; Philippe Maître
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-21       Impact factor: 3.109

8.  Fragmentation reactions of b(5) and a (5) ions containing proline--the structures of a(5) ions.

Authors:  Alex G Harrison
Journal:  J Am Soc Mass Spectrom       Date:  2011-09-20       Impact factor: 3.109

9.  Structures of a(n)* ions derived from protonated pentaglycine and pentaalanine: results from IRMPD spectroscopy and DFT calculations.

Authors:  Junfang Zhao; Justin Kai-Chi Lau; Josipa Grzetic; Udo H Verkerk; Jos Oomens; K W Michael Siu; Alan C Hopkinson
Journal:  J Am Soc Mass Spectrom       Date:  2013-09-12       Impact factor: 3.109

10.  Influence of a Gamma Amino Acid on the Structures and Reactivity of Peptide a(3) Ions.

Authors:  Matthew C Bernier; Bela Paizs; Vicki H Wysocki
Journal:  Int J Mass Spectrom       Date:  2012-04-15       Impact factor: 1.986

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