Literature DB >> 16329907

Stable isotope probing reveals the dominant role of Burkholderia species in aerobic degradation of PCBs.

Stefanie Tillmann1, Carsten Strömpl, Kenneth N Timmis, Wolf-Rainer Abraham.   

Abstract

The active bacteria of a biofilm community grown directly on polychlorinated biphenyl (PCB) droplets were analyzed by 16S rRNA fingerprinting, identified by their 16S rRNA gene sequences and fatty acid profiling, and compared with isolates from the biofilm. Although, the multi-species biofilm degraded di- and trichlorinated PCB-congeners these substrates were not attacked by its individual isolated members, which suggests that a metabolic network is responsible for PCB degradation in the biofilm. The community metabolized [U-13C]-2,2'-dichlorobiphenyl incorporating the label into certain phospholipid fatty acids matching those found in Burkholderia species. In contrast, abundant biofilm community members, like Methylobacterium species, did not incorporate the label. These results provide prima faciae evidence for Burkholderia species as the main degraders of PCBs in this type of aerobic soils.

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Year:  2004        PMID: 16329907     DOI: 10.1016/j.femsec.2004.11.014

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  18 in total

1.  Three stages of a biofilm community developing at the liquid-liquid interface between polychlorinated biphenyls and water.

Authors:  Alexandre José Macedo; Ute Kuhlicke; Thomas R Neu; Kenneth N Timmis; Wolf-Rainer Abraham
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

2.  Importance of soil organic matter for the diversity of microorganisms involved in the degradation of organic pollutants.

Authors:  Dominik Neumann; Anke Heuer; Michael Hemkemeyer; Rainer Martens; Christoph C Tebbe
Journal:  ISME J       Date:  2014-01-16       Impact factor: 10.302

3.  The effects of individual PCB congeners on the soil bacterial community structure and the abundance of biphenyl dioxygenase genes.

Authors:  Paola A Correa; LianShin Lin; Craig L Just; Dingfei Hu; Keri C Hornbuckle; Jerald L Schnoor; Benoit Van Aken
Journal:  Environ Int       Date:  2009-08-28       Impact factor: 9.621

4.  Biphenyl-metabolizing bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls as revealed by stable isotope probing.

Authors:  Ondrej Uhlik; Katerina Jecna; Martina Mackova; Cestmir Vlcek; Miluse Hroudova; Katerina Demnerova; Vaclav Paces; Tomas Macek
Journal:  Appl Environ Microbiol       Date:  2009-08-21       Impact factor: 4.792

5.  Biostimulation of the autochthonous microbial community for the depletion of polychlorinated biphenyls (PCBs) in contaminated sediments.

Authors:  Simona Di Gregorio; Hassan Azaizeh; Roberto Lorenzi
Journal:  Environ Sci Pollut Res Int       Date:  2012-12-04       Impact factor: 4.223

6.  DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment.

Authors:  Woo Jun Sul; Joonhong Park; John F Quensen; Jorge L M Rodrigues; Laurie Seliger; Tamara V Tsoi; Gerben J Zylstra; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2009-07-31       Impact factor: 4.792

7.  Phyto/rhizoremediation studies using long-term PCB-contaminated soil.

Authors:  Martina Mackova; Petra Prouzova; Petr Stursa; Edita Ryslava; Ondrej Uhlik; Katarina Beranova; Jan Rezek; Veronika Kurzawova; Katerina Demnerova; Tomas Macek
Journal:  Environ Sci Pollut Res Int       Date:  2009-11       Impact factor: 4.223

8.  Field-based stable isotope probing reveals the identities of benzoic acid-metabolizing microorganisms and their in situ growth in agricultural soil.

Authors:  Graham M Pumphrey; Eugene L Madsen
Journal:  Appl Environ Microbiol       Date:  2008-05-09       Impact factor: 4.792

9.  PCBs attenuation and abundance of Dehalococcoides spp., bphC, CheA, and flic genes in typical polychlorinated biphenyl-polluted soil under floody and dry soil conditions.

Authors:  Muhammad Zaffar Hashmi; Zhihui Qin; Xiaoyan Yao; Zulkifl Ahmed; Su Xiaomei; Chaofeng Shen; Xianjin Tang
Journal:  Environ Sci Pollut Res Int       Date:  2015-10-27       Impact factor: 4.223

10.  The tomato rhizosphere, an environment rich in nitrogen-fixing Burkholderia species with capabilities of interest for agriculture and bioremediation.

Authors:  Jesús Caballero-Mellado; Janette Onofre-Lemus; Paulina Estrada-de Los Santos; Lourdes Martínez-Aguilar
Journal:  Appl Environ Microbiol       Date:  2007-06-29       Impact factor: 4.792

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