Literature DB >> 16327775

Eukaryotic Lsm proteins: lessons from bacteria.

Carol J Wilusz1, Jeffrey Wilusz.   

Abstract

Over the last five years Sm-like (Lsm) proteins have emerged as important players in many aspects of RNA metabolism, including splicing, nuclear RNA processing and messenger RNA decay. However, their precise function in these pathways remains somewhat obscure. In contrast, the role of the bacterial Lsm protein Hfq, which bears striking similarities in both structure and function to Lsm proteins, is much better characterized. In this perspective, we have highlighted several functions that Hfq shares with Lsm proteins and put forward hypotheses based on parallels between the two that might further the understanding of Lsm function.

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Year:  2005        PMID: 16327775     DOI: 10.1038/nsmb1037

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  70 in total

1.  The structural basis of Edc3- and Scd6-mediated activation of the Dcp1:Dcp2 mRNA decapping complex.

Authors:  Simon A Fromm; Vincent Truffault; Julia Kamenz; Joerg E Braun; Niklas A Hoffmann; Elisa Izaurralde; Remco Sprangers
Journal:  EMBO J       Date:  2011-11-15       Impact factor: 11.598

2.  Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition.

Authors:  Evelyn Sauer; Steffen Schmidt; Oliver Weichenrieder
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

3.  Protein subunit interfaces: A statistical analysis of hot spots in Sm proteins.

Authors:  Srđan D Stojanović; Božidarka L Zarić; Snežana D Zarić
Journal:  J Mol Model       Date:  2010-07-23       Impact factor: 1.810

4.  Interactions of the RNA-binding protein Hfq with cspA mRNA, encoding the major cold shock protein.

Authors:  J S Hankins; H Denroche; G A Mackie
Journal:  J Bacteriol       Date:  2010-03-16       Impact factor: 3.490

Review 5.  Developments in RNA splicing and disease.

Authors:  Michael G Poulos; Ranjan Batra; Konstantinos Charizanis; Maurice S Swanson
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

6.  Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.

Authors:  Antonia M G van den Elzen; Julien Henri; Noureddine Lazar; María Eugenia Gas; Dominique Durand; François Lacroute; Magali Nicaise; Herman van Tilbeurgh; Bertrand Séraphin; Marc Graille
Journal:  Nat Struct Mol Biol       Date:  2010-11-21       Impact factor: 15.369

7.  Hfqs in Bacillus anthracis: Role of protein sequence variation in the structure and function of proteins in the Hfq family.

Authors:  Catherine Vrentas; Rodolfo Ghirlando; Andrea Keefer; Zonglin Hu; Aurelie Tomczak; Apostolos G Gittis; Athulaprabha Murthi; David N Garboczi; Susan Gottesman; Stephen H Leppla
Journal:  Protein Sci       Date:  2015-08-30       Impact factor: 6.725

8.  Oscillating kissing stem-loop interactions mediate 5' scanning-dependent translation by a viral 3'-cap-independent translation element.

Authors:  Aurélie M Rakotondrafara; Charlotta Polacek; Eva Harris; W Allen Miller
Journal:  RNA       Date:  2006-08-18       Impact factor: 4.942

9.  Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 A resolution.

Authors:  Debanu Das; Piotr Kozbial; Herbert L Axelrod; Mitchell D Miller; Daniel McMullan; S Sri Krishna; Polat Abdubek; Claire Acosta; Tamara Astakhova; Prasad Burra; Dennis Carlton; Connie Chen; Hsiu-Ju Chiu; Thomas Clayton; Marc C Deller; Lian Duan; Ylva Elias; Marc-André Elsliger; Dustin Ernst; Carol Farr; Julie Feuerhelm; Anna Grzechnik; Slawomir K Grzechnik; Joanna Hale; Gye Won Han; Lukasz Jaroszewski; Kevin K Jin; Hope A Johnson; Heath E Klock; Mark W Knuth; Abhinav Kumar; David Marciano; Andrew T Morse; Kevin D Murphy; Edward Nigoghossian; Amanda Nopakun; Linda Okach; Silvya Oommachen; Jessica Paulsen; Christina Puckett; Ron Reyes; Christopher L Rife; Natasha Sefcovic; Sebastian Sudek; Henry Tien; Christine Trame; Christina V Trout; Henry van den Bedem; Dana Weekes; Aprilfawn White; Qingping Xu; Keith O Hodgson; John Wooley; Ashley M Deacon; Adam Godzik; Scott A Lesley; Ian A Wilson
Journal:  Proteins       Date:  2009-05-01

10.  The cellular decapping activators LSm1, Pat1, and Dhh1 control the ratio of subgenomic to genomic Flock House virus RNAs.

Authors:  Mireia Giménez-Barcons; Isabel Alves-Rodrigues; Jennifer Jungfleisch; Priscilla M Van Wynsberghe; Paul Ahlquist; Juana Díez
Journal:  J Virol       Date:  2013-03-27       Impact factor: 5.103

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