Literature DB >> 16316719

Metabolic response to exogenous ethanol in yeast: an in vivo NMR and mathematical modelling approach.

Silvia Martini1, Maso Ricci, Fiora Bartolini, Claudia Bonechi, Daniela Braconi, Lia Millucci, Annalisa Santucci, Claudio Rossi.   

Abstract

The understanding of the metabolic behaviour of complex systems such as eukaryotic cells needs the development of new approaches that are able to deal with the complexity due to a large number of interactions within the system. In this paper, we applied an approach based on the combined use of in vivo NMR experiments and mathematical modelling in order to analyze the metabolic response to ethanol stress in a wild-strain of Saccharomyces cerevisiae. Considering the cellular metabolic processes resulting from activation, inhibition, and feed-back activities, we developed a model able to describe the modulation of the whole system induced by an external stress due to increasing concentrations of exogenous ethanol. This approach was able to interpret the experimental results in terms of metabolic response to exogenous ethanol in the yeast. The robustness and flexibility of the model enables it to work correctly at different initial exogenous ethanol concentrations.

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Year:  2005        PMID: 16316719     DOI: 10.1016/j.bpc.2005.10.010

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  4 in total

1.  In vivo NMR study of yeast fermentative metabolism in the presence of ferric irons.

Authors:  Maso Ricci; Silvia Martini; Claudia Bonechi; Daniela Braconi; Annalisa Santucci; Claudio Rossi
Journal:  J Biosci       Date:  2011-03       Impact factor: 1.826

2.  Metabolic response to exogenous ethanol in yeast: an in vivo statistical total correlation NMR spectroscopy approach.

Authors:  Maso Ricci; Marianna Aggravi; Claudia Bonechi; Silvia Martini; Anna Maria Aloisi; Claudio Rossi
Journal:  J Biosci       Date:  2012-09       Impact factor: 1.826

3.  Quantitative 1H-NMR-metabolomics reveals extensive metabolic reprogramming and the effect of the aquaglyceroporin FPS1 in ethanol-stressed yeast cells.

Authors:  Artur B Lourenço; Filipa C Roque; Miguel C Teixeira; José R Ascenso; Isabel Sá-Correia
Journal:  PLoS One       Date:  2013-02-08       Impact factor: 3.240

4.  Glucose induces rapid changes in the secretome of Saccharomyces cerevisiae.

Authors:  Bennett J Giardina; Bruce A Stanley; Hui-Ling Chiang
Journal:  Proteome Sci       Date:  2014-02-12       Impact factor: 2.480

  4 in total

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