Literature DB >> 16313444

Parastrombidinopsis shimi n. gen., n. sp. (Ciliophora: Choreotrichia) from the coastal waters of Korea: morphology and small subunit ribosomal DNA sequence.

Jae Seong Kim1, Hae Jin Jeong, Michaela C Strüeder-Kypke, Denis H Lynn, Sanghee Kim, Jong Hyeok Kim, Seung Hyeon Lee.   

Abstract

The planktonic ciliate Parastrombidinopsis shimi n. gen., n. sp. is described from both living cells and quantitative protargol-stained (QPS) preparations and the sequence of the small subunit rDNA (SSU rDNA) is reported. This species is almost oval when the cells are alive; when stained, it is cylindrical for the upper two-fifths, half-bowl shaped for the middle two-fifths, and narrow rodshaped for the lower one-fifth. The ranges (and mean +/- standard deviation, n = 20) of cell length, cell width, and oral diameter of living cells were 112-221 microm (168 +/- 39), 88-176 microm (121 +/- 30), and 53-110 microm (80 +/- 14), respectively, while those of the QPS-stained specimens (n = 54) were 88-225 microm (162 +/- 29), 55-163 microm (102 +/- 19), and 53-98 microm (69 +/- 9), respectively. Thirty-six to 48 external oral polykinetids had cilia 25-40 microm long. However, unlike Strombidinopsis species sensu stricto, P. shimi has an external oral polykinetid zone that is an open circle. This species has two shorter polykinetids associated with the end of the oral polykinetid zone, deep in the oral cavity. Like Strombidinopsis species in the subclass Choreotrichia, 36-50 somatic kineties were equally spaced around the cell body and extended from the oral to the posterior regions with 68-105 dikinetids per kinety. Both kinetosomes of each kinetid bore cilia 3-10 microm long. Parastrombidinopsis shimi had 2 (1-4) ovoid macronuclei of 20-82 x 15-32 microm. When properly aligned, the sequence of the SSU rDNA of P. shimi (GenBank Accession No. AJ786648) was approximately 5% different from that of Strobilidium caudatum and 6% different from that of two Strombidinopsis species. Based both on morphology and gene sequence divergence, we establish this is as a new species in a new genus belonging to the family Strombidinopsidae.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16313444     DOI: 10.1111/j.1550-7408.2005.00062.x

Source DB:  PubMed          Journal:  J Eukaryot Microbiol        ISSN: 1066-5234            Impact factor:   3.346


  7 in total

1.  Redescription of Tintinnopsis cylindrica Daday, 1887 (Ciliophora: Spirotricha) and Unification of Tintinnid Terminology.

Authors:  Sabine Agatha; Jeannette Cornelie Riedel-Lorjé
Journal:  Acta Protozool       Date:  2006       Impact factor: 0.892

2.  Diversity Patterns of Protists Are Highly Affected by Methods Disentangling Biological Variants: A Case Study in Oligotrich (s.l.) Ciliates.

Authors:  Jiahui Xu; Jianlin Han; Hua Su; Changyu Zhu; Zijing Quan; Lei Wu; Zhenzhen Yi
Journal:  Microorganisms       Date:  2022-04-27

3.  Phylogeny of the order Choreotrichida (Ciliophora, Spirotricha, Oligotrichea) as inferred from morphology, ultrastructure, ontogenesis, and SSrRNA gene sequences.

Authors:  Sabine Agatha; Michaela C Strüder-Kypke
Journal:  Eur J Protistol       Date:  2006-12-12       Impact factor: 3.020

4.  Global diversity of aloricate Oligotrichea (Protista, Ciliophora, Spirotricha) in marine and brackish sea water.

Authors:  Sabine Agatha
Journal:  PLoS One       Date:  2011-08-10       Impact factor: 3.240

5.  Molecular systematics and ultrastructural characterization of a forgotten species: Chattonidium setense (Ciliophora, Heterotrichea).

Authors:  Letizia Modeo; Giovanna Rosati; Ilaria Andreoli; Simone Gabrielli; Franco Verni; Giulio Petroni
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2006-02-12       Impact factor: 3.493

6.  Ultrastructural Studies on a Model Tintinnid - Schmidingerella meunieri (Kofoid & Campbell, 1929) Agatha & Strüder-Kypke, 2012 (Ciliophora). II. The Oral Apparatus.

Authors:  Michael S Gruber; Birgit Weißenbacher; Sabine Agatha
Journal:  J Eukaryot Microbiol       Date:  2020-05-11       Impact factor: 3.346

7.  Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change.

Authors:  Sophie Charvet; Warwick F Vincent; André Comeau; Connie Lovejoy
Journal:  Front Microbiol       Date:  2012-12-20       Impact factor: 5.640

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.