Literature DB >> 16313235

A novel subfamily of monomeric inorganic pyrophosphatases in photosynthetic eukaryotes.

María R Gómez-García1, Manuel Losada, Aurelio Serrano.   

Abstract

Two sPPases (soluble inorganic pyrophosphatases, EC 3.6.1.1) have been isolated from the microalga Chlamydomonas reinhardtii. Both are monomeric proteins of organellar localization, the chloroplastic sPPase I [Cr (Ch. reinhardtii)-sPPase I, 30 kDa] is a major isoform and slightly larger protein than the mitochondrial sPPase II (Cr-sPPase II, 24 kDa). They are members of sPPase family I and are encoded by two different cDNAs, as demonstrated by peptide mass fingerprint analysis. Molecular phylogenetic analyses indicated that Cr-sPPase I is closely related to other eukaryotic sPPases, whereas Cr-sPPase II resembles its prokaryotic counterparts. Chloroplastic sPPase I may have replaced a cyanobacterial ancestor very early during plastid evolution. Cr-sPPase II orthologues are found in members of the green photosynthetic lineage, but not in animals or fungi. These two sPPases from photosynthetic eukaryotes are novel monomeric family I sPPases with different molecular phylogenies and cellular localizations.

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Year:  2006        PMID： 16313235      PMCID： PMC1409696          DOI： 10.1042/BJ20051657

Source DB:  PubMed          Journal:  Biochem J        ISSN： 0264-6021            Impact factor:   3.857


  39 in total

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Authors:  T Sivula; A Salminen; A N Parfenyev; P Pohjanjoki; A Goldman; B S Cooperman; A A Baykov; R Lahti
Journal:  FEBS Lett       Date:  1999-07-02       Impact factor: 4.124

2.  ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites.

Authors:  O Emanuelsson; H Nielsen; G von Heijne
Journal:  Protein Sci       Date:  1999-05       Impact factor: 6.725

3.  MITOTIC REPLICATION OF DEOXYRIBONUCLEIC ACID IN CHLAMYDOMONAS REINHARDI.

Authors:  N Sueoka
Journal:  Proc Natl Acad Sci U S A       Date:  1960-01       Impact factor: 11.205

4.  Yeast PPA2 gene encodes a mitochondrial inorganic pyrophosphatase that is essential for mitochondrial function.

Authors:  M Lundin; H Baltscheffsky; H Ronne
Journal:  J Biol Chem       Date:  1991-07-05       Impact factor: 5.157

5.  Yeast inorganic pyrophosphatase. I. New methods of purification, assay, and crystallization.

Authors:  B S Cooperman; N Y Chiu; R H Bruckmann; G J Bunick; G P McKenna
Journal:  Biochemistry       Date:  1973-04-24       Impact factor: 3.162

6.  Purification and characterization of 33 kilodalton protein of spinach chloroplasts.

Authors:  T Kuwabara; N Murata
Journal:  Biochim Biophys Acta       Date:  1979-12-14

7.  Conservation of functional residues between yeast and E. coli inorganic pyrophosphatases.

Authors:  R Lahti; L F Kolakowski; J Heinonen; M Vihinen; K Pohjanoksa; B S Cooperman
Journal:  Biochim Biophys Acta       Date:  1990-05-08

8.  Crystallographic identification of metal-binding sites in Escherichia coli inorganic pyrophosphatase.

Authors:  J Kankare; T Salminen; R Lahti; B S Cooperman; A A Baykov; A Goldman
Journal:  Biochemistry       Date:  1996-04-16       Impact factor: 3.162

9.  Cloning and expression of a unique inorganic pyrophosphatase from Bacillus subtilis: evidence for a new family of enzymes.

Authors:  T Shintani; T Uchiumi; T Yonezawa; A Salminen; A A Baykov; R Lahti; A Hachimori
Journal:  FEBS Lett       Date:  1998-11-20       Impact factor: 4.124

10.  The structure of E.coli soluble inorganic pyrophosphatase at 2.7 A resolution.

Authors:  J Kankare; G S Neal; T Salminen; T Glumoff; T ] Glumhoff T [corrected to Glumoff; B S Cooperman; R Lahti; A Goldman
Journal:  Protein Eng       Date:  1994-07
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  8 in total

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2.  Structure of the Mycobacterium tuberculosis soluble inorganic pyrophosphatase Rv3628 at pH 7.0.

Authors:  Stefano Benini; Keith Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-26

3.  Virus-induced gene silencing of plastidial soluble inorganic pyrophosphatase impairs essential leaf anabolic pathways and reduces drought stress tolerance in Nicotiana benthamiana.

Authors:  Gavin M George; Margaretha J van der Merwe; Adriano Nunes-Nesi; Rolene Bauer; Alisdair R Fernie; Jens Kossmann; James R Lloyd
Journal:  Plant Physiol       Date:  2010-07-06       Impact factor: 8.340

4.  Inorganic pyrophosphatase defects lead to cell cycle arrest and autophagic cell death through NAD+ depletion in fermenting yeast.

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Journal:  J Biol Chem       Date:  2013-03-11       Impact factor: 5.157

5.  Vacuolar H+-Pyrophosphatase and Cytosolic Soluble Pyrophosphatases Cooperatively Regulate Pyrophosphate Levels in Arabidopsis thaliana.

Authors:  Shoji Segami; Takaaki Tomoyama; Shingo Sakamoto; Shizuka Gunji; Mayu Fukuda; Satoru Kinoshita; Nobutaka Mitsuda; Ali Ferjani; Masayoshi Maeshima
Journal:  Plant Cell       Date:  2018-04-24       Impact factor: 11.277

6.  A score of the ability of a three-dimensional protein model to retrieve its own sequence as a quantitative measure of its quality and appropriateness.

Authors:  León P Martínez-Castilla; Rogelio Rodríguez-Sotres
Journal:  PLoS One       Date:  2010-09-07       Impact factor: 3.240

7.  Inhibition of plastid PPase and NTT leads to major changes in starch and tuber formation in potato.

Authors:  Mariette Andersson; Helle Turesson; Stéphanie Arrivault; Youjun Zhang; Ann-Sofie Fält; Alisdair R Fernie; Per Hofvander
Journal:  J Exp Bot       Date:  2018-04-09       Impact factor: 6.992

8.  DynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex's Dynamics.

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  8 in total

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