Literature DB >> 1631148

The synapsis event in the homologous pairing of DNAs: RecA recognizes and pairs less than one helical repeat of DNA.

P Hsieh1, C S Camerini-Otero, R D Camerini-Otero.   

Abstract

A key step in homologous recombination is the alignment and pairing of homologous DNAs. The Escherichia coli RecA protein initiates pairing by binding to single-strand DNA, forming a helical nucleoprotein filament. We demonstrate that in the presence of the nonhydrolyzable ATP analogue adenosine 5'-[gamma-thio]triphosphate and ADP, RecA can pair a homologous oligonucleotide 15 bases long with a duplex DNA to yield synaptic complexes consisting of the oligonucleotide and duplex DNA stabilized by RecA. RecA can pair as few as eight bases of homology to form such synaptic complexes. The homologous DNAs remain paired to each other upon removal of RecA provided that the length of shared homology is at least 26 base pairs. Based on our findings and the work of others, we propose that in vitro, one helical turn of a RecA nucleoprotein filament containing approximately six RecA monomers and 15 bases of single-strand DNA is the functional unit sufficient to carry out the homology search.

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Year:  1992        PMID: 1631148      PMCID: PMC49527          DOI: 10.1073/pnas.89.14.6492

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Pairing of homologous DNA sequences by proteins: evidence for three-stranded DNA.

Authors:  P Hsieh; C S Camerini-Otero; R D Camerini-Otero
Journal:  Genes Dev       Date:  1990-11       Impact factor: 11.361

2.  Stable three-stranded DNA made by RecA protein.

Authors:  B J Rao; M Dutreix; C M Radding
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-15       Impact factor: 11.205

3.  Extensive 3'-overhanging, single-stranded DNA associated with the meiosis-specific double-strand breaks at the ARG4 recombination initiation site.

Authors:  H Sun; D Treco; J W Szostak
Journal:  Cell       Date:  1991-03-22       Impact factor: 41.582

Review 4.  Conjugational recombination in E. coli: myths and mechanisms.

Authors:  G R Smith
Journal:  Cell       Date:  1991-01-11       Impact factor: 41.582

5.  Energetics of RecA-mediated recombination reactions. Without ATP hydrolysis RecA can mediate polar strand exchange but is unable to recycle.

Authors:  W Rosselli; A Stasiak
Journal:  J Mol Biol       Date:  1990-11-20       Impact factor: 5.469

6.  Integration of DNA fragments by illegitimate recombination in Saccharomyces cerevisiae.

Authors:  R H Schiestl; T D Petes
Journal:  Proc Natl Acad Sci U S A       Date:  1991-09-01       Impact factor: 11.205

7.  Asymmetry in the recA protein-DNA filament.

Authors:  S D Lauder; S C Kowalczykowski
Journal:  J Biol Chem       Date:  1991-03-25       Impact factor: 5.157

8.  Nucleus-driven multiple large-scale deletions of the human mitochondrial genome: a new autosomal dominant disease.

Authors:  M Zeviani; N Bresolin; C Gellera; A Bordoni; M Pannacci; P Amati; M Moggio; S Servidei; G Scarlato; S DiDonato
Journal:  Am J Hum Genet       Date:  1990-12       Impact factor: 11.025

9.  recA protein from Escherichia coli. a very rapid and simple purification procedure: binding of adenosine 5'-triphosphate and adenosine 5'-diphosphate by the homogeneous protein.

Authors:  S M Cotterill; A C Satterthwait; A R Fersht
Journal:  Biochemistry       Date:  1982-08-31       Impact factor: 3.162

10.  Selective cleavage of human DNA: RecA-assisted restriction endonuclease (RARE) cleavage.

Authors:  L J Ferrin; R D Camerini-Otero
Journal:  Science       Date:  1991-12-06       Impact factor: 47.728

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  74 in total

1.  DNA sequence similarity requirements for interspecific recombination in Bacillus.

Authors:  J Majewski; F M Cohan
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

Review 2.  Homologous genetic recombination as an intrinsic dynamic property of a DNA structure induced by RecA/Rad51-family proteins: a possible advantage of DNA over RNA as genomic material.

Authors:  T Shibata; T Nishinaka; T Mikawa; H Aihara; H Kurumizaka; S Yokoyama; Y Ito
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

3.  Homologous recombination at the border: insertion-deletions and the trapping of foreign DNA in Streptococcus pneumoniae.

Authors:  Marc Prudhomme; Virginie Libante; Jean-Pierre Claverys
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

4.  DNA inversions between short inverted repeats in Escherichia coli.

Authors:  M A Schofield; R Agbunag; J H Miller
Journal:  Genetics       Date:  1992-10       Impact factor: 4.562

5.  Similia similibus: pairing of homologous chromosomes driven by the physicochemical properties of DNA.

Authors:  Arturo Falaschi
Journal:  HFSP J       Date:  2008-09-15

6.  On the influence of protein-DNA register during homologous recombination.

Authors:  Eric C Greene
Journal:  Cell Cycle       Date:  2016       Impact factor: 4.534

7.  A role for RNA synthesis in homologous pairing events.

Authors:  H Kotani; E B Kmiec
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

8.  RNA facilitates RecA-mediated DNA pairing and strand transfer between molecules bearing limited regions of homology.

Authors:  H Kotani; M W Germann; A Andrus; R Vinayak; B Mullah; E B Kmiec
Journal:  Mol Gen Genet       Date:  1996-03-20

9.  RecA tests homology at both pairing and strand exchange.

Authors:  L R Bazemore; E Folta-Stogniew; M Takahashi; C M Radding
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-28       Impact factor: 11.205

10.  Polarity of DNA strand exchange promoted by recombination proteins of the RecA family.

Authors:  R C Gupta; E I Golub; M S Wold; C M Radding
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

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