Literature DB >> 1631054

A simple explanation of the electrostatics of the B-to-Z transition of DNA.

M Guéron1, J P Demaret.   

Abstract

Whereas the phosphates of B-DNA jut out into the solution, those of Z-DNA, being closer to DNA matter, are less subject to electrostatic screening by counterions. We present simple planar models of B- and Z-DNA that reflect these geometric features. The ionic strength dependence of the difference in the Poisson-Boltzmann electrostatic free energy of the models agrees with that measured by Pohl [Pohl, F. M. (1983) Cold Spring Harbor Symp. Quant. Biol. 47, 113-118]. This indicates that the electrostatics of the B-to-Z transition are primarily controlled by a qualitative geometrical difference and not by details of the DNA geometry or by complex electrostatic properties of the ionic solution.

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Year:  1992        PMID: 1631054      PMCID: PMC402093          DOI: 10.1073/pnas.89.13.5740

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  3 in total

1.  Application of polyelectrolyte theory to the study of the B-Z transition in DNA (1).

Authors:  M D Frank-Kamenetskii; A V Lukashin; V V Anshelevich
Journal:  J Biomol Struct Dyn       Date:  1985-08

2.  Salt-induced transition between two double-helical forms of oligo (dC-dG).

Authors:  F M Pohl
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1983

3.  Statistical mechanics of the B----Z transition of DNA: contribution of diffuse ionic interactions.

Authors:  D M Soumpasis
Journal:  Proc Natl Acad Sci U S A       Date:  1984-08       Impact factor: 11.205

  3 in total
  5 in total

1.  A unified theory of the B-Z transition of DNA in high and low concentrations of multivalent ions.

Authors:  M Guéron; J Demaret; M Filoche
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

2.  The transition between the B and Z conformations of DNA investigated by targeted molecular dynamics simulations with explicit solvation.

Authors:  Mika A Kastenholz; Thomas U Schwartz; Philippe H Hünenberger
Journal:  Biophys J       Date:  2006-10-15       Impact factor: 4.033

3.  The Interaction of Radio-Frequency Fields With Dielectric Materials at Macroscopic to Mesoscopic Scales.

Authors:  James Baker-Jarvis; Sung Kim
Journal:  J Res Natl Inst Stand Technol       Date:  2012-02-02

4.  Composite cylinder models of DNA: application to the electrostatics of the B-Z transition.

Authors:  J P Demaret; M Guéron
Journal:  Biophys J       Date:  1993-10       Impact factor: 4.033

5.  Molecular-scale visualization and surface charge density measurement of Z-DNA in aqueous solution.

Authors:  Hiroaki Kominami; Kei Kobayashi; Hirofumi Yamada
Journal:  Sci Rep       Date:  2019-05-02       Impact factor: 4.379

  5 in total

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