Literature DB >> 16307727

tRNA-isoleucine-tryptophan composite gene.

Zhumur Ghosh1, Jayprokas Chakrabarti, Bibekanand Mallick, Smarajit Das, Satyabrata Sahoo, Harmeet Singh Sethi.   

Abstract

Transfer-RNA genes in archaea often have introns intervening between exon sequences. The structural motif at the boundary between exon and intron is the bulge-helix-bulge. Computational investigations of these boundary structures in Haloarcula marismortui lead us to propose that tRNA-isoleucine and tRNA-tryptophan genes are co-located. Precise in silico identification of the splice-sites on the bulges at the exon-intron boundaries lead us to infer that a single intron-containing composite tRNA-gene can give rise to more than one gene product.

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Year:  2005        PMID: 16307727     DOI: 10.1016/j.bbrc.2005.10.183

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  3 in total

1.  Identification and characterization of a tRNA decoding the rare AUA codon in Haloarcula marismortui.

Authors:  Caroline Köhrer; Gayathri Srinivasan; Debabrata Mandal; Bibekanand Mallick; Zhumur Ghosh; Jayprokas Chakrabarti; Uttam L Rajbhandary
Journal:  RNA       Date:  2007-11-12       Impact factor: 4.942

2.  Processing of multiple-intron-containing pretRNA.

Authors:  Giuseppe D Tocchini-Valentini; Paolo Fruscoloni; Glauco P Tocchini-Valentini
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-12       Impact factor: 11.205

3.  The many applications of acid urea polyacrylamide gel electrophoresis to studies of tRNAs and aminoacyl-tRNA synthetases.

Authors:  Caroline Köhrer; Uttam L Rajbhandary
Journal:  Methods       Date:  2008-02       Impact factor: 3.608

  3 in total

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